Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014- 12-02] 46,662 sequences; 679,761,122 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq11038 280 3e-70 seq41338 181 2e-40 seq32174 178 2e-39 seq43756 174 3e-38 seq5960 127 4e-24 seq15624 102 2e-16 seq39739 89.7 1e-12 >seq11038 Length=78219 Score = 280 bits (310), Expect = 3e-70 Identities = 1015/1566 (65%), Gaps = 58/1566 (4%) Strand=Plus/Plus Query 212858 CATGTCCTCGTTCCAGAGGCCCCTGGTCTCC-AGGCACTTGACCAGGTGAGGGTTGACTA 212916 ||| ||||||||||| || |||| | || ||| ||| | ||| || ||||| || | Sbjct 22169 CATCTCCTCGTTCCACAGCCCCC-GTTCAGTGAGGTCCTTCAGCAGATGTGGGTTTACAA 22227 Query 212917 TCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGC 212976 |||| || || || ||||| || || | ||| | ||| ||||||| |||||| Sbjct 22228 TCTGAAACTCTCCAGAGAGGACTCTACGTGTGTAGATGTTGCTGGTGTAGGCTTCGATGG 22287 Query 212977 TCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGAC 213036 ||| ||||| || || || ||||| ||| ||||||||||||||| |||| || |||| Sbjct 22288 ACTCATTGTTGCCGAGTATTTGTGCTGTGGAGGCTGTGGGCATGGGGGCCAACAACAGAC 22347 Query 213037 TGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAG 213096 |||| ||||| ||||| | | || | |||| ||||||||| ||| Sbjct 22348 TGTTTCTCACACCGTGTTTAGCAATCTTCTCCTTAAGCAGCTTCCAGTCCCAGAGCTCAG 22407 Query 213097 ACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGC 213156 || | |||| | |||||||||| |||||| |||||| | ||||| || Sbjct 22408 --TGGGC----ACCTT---TTCCCACATGTCATACTGCAGAATGCCTCTACTCACTGGAG 22458 Query 213157 TGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGG 213216 ||| |||| | || || |||| | | |||| ||| ||| |||| ||||| Sbjct 22459 AGCCTGGGTATGTCTCATAAGGCCCATCTTTTTCTGCCAACTCCCAGCTTGCCTCCAGGG 22518 Query 213217 CAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGA 213276 |||| ||||||||||| ||||| |||| | || ||| || ||| || ||| | | Sbjct 22519 CAGCATAGTAGATGGTCTCAAAGATCTGGATATTCAGCAGCTGGGCTTC-AGGGCTTTCA 22577 Query 213277 AGGGCATCA-TCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGT 213335 | | || | |||| | ||| |||| || || ||||| || || || ||||| || Sbjct 22578 AATGGATAACGCATGAGGATGAAGGCATCTGCAAGACCCTGCACACCAATCCCGATTGGC 22637 Query 213336 CTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAG----GGGTAAAAGTTGCAGTCGAT 213391 ||||| | | ||| || || | || || || | ||||| |||| ||| || Sbjct 22638 CTGTGGCGCTTGTTTGAATT----CTCTGCTTCAGGAACTGGGTAGTAGTTAATGTCAAT 22693 Query 213392 GATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAA 213451 ||||||||||||||| | ||||| ||||| ||| || | ||||| Sbjct 22694 GATCTTGTTGAGGTTTCTTACAATTACTTTAGTGACCGAGGCAAG------CTTTTTGAA 22747 Query 213452 CACGTAGCCCCCGTCCTG---CACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAAC 213508 | || | ||| | ||| || || || ||| ||||| ||| || || Sbjct 22748 GTCAAAGGTGCGTTCCGGAGTAACATACATGTTGAGAGCAATGGAGGCCAAGTTACAGAC 22807 Query 213509 GGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGAT 213568 |||||| || | | ||| ||||||| ||||| ||||||| ||| |||||| ||| Sbjct 22808 GGCCACTTCATCTTTGCTTGTATACTCCACAATCTCAGTGCACAAGTTACTGCATTTGAT 22867 Query 213569 GGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGG 213628 |||||||| ||||| ||||| ||| ||| | ||| ||||| | |||||| || Sbjct 22868 GGTGCCCAAATTCTGCTGGTTACTCTTCCTGTTACAGGCATCTTTGTACAACATGTAAGG 22927 Query 213629 GGACCCGGTCTCTAGCTGGGACACCAGTATCTGGC--TCCAGAGGTACCTGGCCTTGACC 213686 | || || ||| ||| ||| | | | |||| ||| | | | ||||||||| Sbjct 22928 TGTTCCTGTTTCTGTCTGAGACTCGATGA--TGGCATACCACAACTGCTGAGCCTTGACC 22985 Query 213687 ACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGG 213746 |||||| | || || | | | || || || |||||||| | || || | Sbjct 22986 ACCCGCTTCAC-TCTACCCTCCT--GTTCATATTGAGTGTAGAGCTTCTCAAACTCCTCC 23042 Query 213747 CCCCAGACCCT-GTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGTC 213805 ||||| || || |||| || || || ||| ||||| || ||||||| || Sbjct 23043 CCCCA-ACACTCATCCAACCCAGGGCACTCACTGGGGCACATCAGAGACCAGTCCTGGTT 23101 Query 213806 ATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGT 213865 | | || |||| ||||||||| || |||| ||| || || ||| ||||| | | Sbjct 23102 GTTTTCCACCCTCTTCATGAACAGATCAGGGATCCATAGGGCATAGAAGAGGTCTCGTGC 23161 Query 213866 CCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTG 213925 |||| ||| || |||| ||| || ||| || || |||||||| | || ||| Sbjct 23162 CCTCTGCTCCTCTTTACCAGTGTTCTTCTTCAGCTCAAGGAAGTCAAACACATCAAAGTG 23221 Query 213926 CCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCC---TCTTGCCGCCCTGGTCCAC-CA 213981 ||| ||||||| ||| |||||||| || ||||| | | ||||| || |||||||| | Sbjct 23222 CCATGGCTCCAGGTATATGGCAAAAGCACCCGGTCGTTTATTGCCACCTTGGTCCACGTA 23281 Query 213982 GCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGG 214041 || | || ||||| | | | ||| | || || || || || || | || || | Sbjct 23282 GCGT-GCGGTGTTGTTGTACACTCTCAGCATCGGCACAAGGCCATTTGAGTTACCATTTG 23340 Query 214042 TTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCGG 214101 |||| || || || || | | || | ||| | | | || || || || | Sbjct 23341 TTCCAGCAATGTAACTACCTGTTGATCTAATACAGCTAACTGCTACACCAATCCCTCCTG 23400 Query 214102 CGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCAT 214161 | | || ||||| | || || | | | || || ||||| | |||||||||| Sbjct 23401 CAGATTTAGAGATGAGAGCACATTGTTTGAGTGTATCATAAATGCCATCAATGCTGTCAT 23460 Query 214162 CTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAA 214221 | | | | ||||| ||||||||| ||||||||||| || | ||| | |||||| | Sbjct 23461 CCTTCATGGCCAGCAGGAAGCAGCTGGAGAGCTGGGGTCTATTGGTGCCTGCGTTGAACA 23520 Query 214222 GCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTG 214281 | ||||| |||||| | | |||| | ||| || || |||||||||| | | ||| Sbjct 23521 GAGTGGGAGAGGCATGAGTGAACCACTTCTCAGACAGCAGGTTGTAGGTCTCAATGGCTG 23580 Query 214282 AGGGGATGTC-GTGCTTGTGGATCTGTAGAGCGCACCTCATCAGCATGTGCTGGGGCCTC 214340 || || ||| |||||||| | ||| ||||| ||||||||||| || | | Sbjct 23581 CATCTATATCAGTG-TTGTGGATTCCAACAGCTACTCTCATGAGCATGTGCTGTGGGCGC 23639 Query 214341 TCTATGGGTCCTTTGGGGCCCTTG------AGCAGGTAGGAGCGCTCCAGAGTCTTGAAC 214394 || | |||| || ||| ||||||||||||||||| | ||||| || Sbjct 23640 TC---AGCCACTTT---ACCATTGATTTTCAGCAGGTAGGAGCGCTCTAATGTCTTAAAG 23693 Query 214395 CCAAAG 214400 |||||| Sbjct 23694 CCAAAG 23699 >seq41338 Length=182370 Score = 181 bits (200), Expect = 2e-40 Identities = 187/245 (76%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 241389 GCTGACAGCCTTGGCACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCC 241448 |||||||||| || | |||| |||||||| ||||||||| || ||||| ||||||| Sbjct 152264 GCTGACAGCCACTGCTTACGTGCGTCAGGACCTTCTGTTTGAGCTGAGCCACTTGGTCCC 152323 Query 241449 GCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACTTTCT 241508 |||| || ||||| || |||||||| || ||||||||| || ||||| || ||||| | Sbjct 152324 GCAGCACTGACGCCGTGTTGGACAGCCCCGCGTTGTCACTTTTCAGCACTTTTACTTTTT 152383 Query 241509 CCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGT 241568 |||||| ||| || ||||| || || ||||| || || || || || || |||| |||| Sbjct 152384 CCTCCAACCGGGCAATGCGCTCGAGCTTGCGTCGCCGACACTTAGTAGCAGCCAGTCGGT 152443 Query 241569 TCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGAGACT 241628 ||| || ||||| | || || ||||| || |||||| ||||| ||||| || ||| Sbjct 152444 TCCTCAGCCTCTTCCTCTCGGCTTTGATCCGCTCCTGGGTCTCCAGATCGATGGGGGACA 152503 Query 241629 TGGGT 241633 | ||| Sbjct 152504 TTGGT 152508 >seq32174 Length=4431 Score = 178 bits (196), Expect = 2e-39 Identities = 167/213 (78%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 241415 AGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGT 241474 || |||| ||||||||| || |||||||||||||||| || |||||||| | ||| Sbjct 1175 AGCACCTTCTGTTTGAGCTGCTCCACCTGGTCCCGCAGCACAGACGCGGTGGACGCCAGG 1234 Query 241475 CCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGT 241534 | | ||| | | |||||| ||||||||| ||||||||||||| |||||| |||||| Sbjct 1235 TCCGTGTTCTGGGTCTTGAGGCTCTTCACTTTGTCCTCCAGCCGCGAGATGCGCTCCAGT 1294 Query 241535 TTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTG 241594 ||||| |||||||| |||| ||| || | |||||| || || ||||| | || |||||| Sbjct 1295 TTGCGGCGGCGGCACTTGGAGGCGGCGATGCGGTTTCGCAGCCTCTTCCTCTCGGCCTTG 1354 Query 241595 ATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627 ||||| ||||| ||||||||||| || ||| Sbjct 1355 ATGCGCTCCTGAGAGTCCATGTCGATGGGGGAC 1387 >seq43756 Length=117127 Score = 174 bits (192), Expect = 3e-38 Identities = 161/204 (79%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 241424 TGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGTCCTGCGTTG 241483 |||||||||||||| ||||| || ||||| || || || || || |||||||| |||||| Sbjct 26101 TGTTTGAGTTGGGCTACCTGCTCGCGCAGCACAGAAGCAGTGTTTGACAGTCCGGCGTTG 26160 Query 241484 TCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGG 241543 || | || || || || ||||| || ||||| || || || ||||||||||| |||| Sbjct 26161 TCCGTTTTCAGGACTTTAACTTTTTCTTCCAGACGAGCAATACGTTCCAGTTTTCGCCTC 26220 Query 241544 CGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCC 241603 ||||| |||| |||||||| ||||||| || | ||| || || || |||||||| ||| Sbjct 26221 CGGCACTTGGAGGCTGCCAGTCGGTTCCTCAGACGCTTGCGCTCGGCTTTGATGCGCTCC 26280 Query 241604 TGGTCCTCCATGTCGATCGGAGAC 241627 |||| ||||| ||||| |||||| Sbjct 26281 TGGTTCTCCAAATCGATGGGAGAC 26304 >seq5960 Length=42049 Score = 127 bits (140), Expect = 4e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 241418 ACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGTCCT 241477 |||| |||||| || || |||||||| || || |||||| |||||| | ||| | Sbjct 2827 ACCTTCTGTTTAAGCTGTGCCACCTGCTCGCGAAGAACGCTCGCGGTGGATGCCAGCTCA 2768 Query 241478 GCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTG 241537 | ||| | | || || ||| ||||| ||||| ||||| | ||| || |||||||| Sbjct 2767 GTGTTTTGTGTTTTTAGTGTCTTTACTTTGTCCTCGAGCCGTGAGATACGCTCCAGTTTA 2708 Query 241538 CGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATG 241597 || |||||| |||| ||| || | |||||| || || |||| || || ||||||||| Sbjct 2707 CGTTTGCGGCACTTGGAGGCGGCGATGCGGTTGCGCAGCTTCTTCCGCTCTGCCTTGATG 2648 Query 241598 CGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627 || ||||||| |||||||| || || ||| Sbjct 2647 CGCTCCTGGTTGTCCATGTCAATGGGCGAC 2618 >seq15624 Length=12484 Score = 102 bits (112), Expect = 2e-16 Identities = 104/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 212918 CTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCT 212977 |||||| || ||||| |||||||| | ||||| ||| ||||| | ||| ||| Sbjct 10774 CTGGAACTCCCCTGAAAGCACCCTACGAGTGTAAATGTTGCTGGTGTAAGCCTCAATGGA 10833 Query 212978 CTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACT 213037 ||||||||| || || ||||| |||||| |||||||||||| || |||| || || || Sbjct 10834 CTCGTTGTTGCCGAGGATCTGGGCAGTGGAGGCTGTGGGCATTGGGGCCAGGAGCAGGCT 10893 Query 213038 GTTCCTCACTCCGTGC 213053 ||||||||| || ||| Sbjct 10894 GTTCCTCACACCATGC 10909 Score = 91.5 bits (100), Expect = 3e-13 Identities = 125/171 (73%), Gaps = 4/171 (2%) Strand=Plus/Plus Query 213527 TGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTG 213586 |||||| || | ||||| ||||||||||||||| || ||||||||| || ||||| || Sbjct 11851 TGTGTATTCTACAATCTCAGTGCACAGGTTGCTGGATTTGATGGTGCCTAGATTCTGCTG 11910 Query 213587 GTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTG 213646 ||| ||| ||| | ||| |||||||||||||| |||| || |||||| ||| Sbjct 11911 GTTGCTCTTCCTATTGCATGCATCTTTGTAGAGCATGTATGGGGTACCCGTCTCTGTCTG 11970 Query 213647 GGACACCAGTATCTGGC--TCCAGAGGTACCTGGCCTTGACCACCCGCCTG 213695 ||| || || |||| ||| || | | |||||| ||||| ||| || Sbjct 11971 TGAC-TCAATA-ATGGCATACCACAGCTGCTGGGCCTTCACCACACGCTTG 12019 >seq39739 Length=4710 Score = 89.7 bits (98), Expect = 1e-12 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 38960 CACCAGCTCCCACCTGTTGGCGGAGAAGAGCAGGTGGACTGCGTGGTCGTCCAGCTCCGT 39019 ||| || ||||| |||||||| |||||||||||||| || | |||||| |||| || | Sbjct 4594 CACTAGTTCCCATCTGTTGGCAGAGAAGAGCAGGTGCACAGTGTGGTCCTCCAAATCGCT 4653 Query 39020 CTTACTCTCCAGGTACGAGCTGATCATCTTTCCGATGGTAGTGGTTCTGTCGGGGAA 39076 || |||| ||||| | ||||||| || || ||||| ||||| ||||| || || Sbjct 4654 TTTCTTCTCTAGGTAGGCACTGATCAACTGCCCAATGGTGGTGGTCCTGTCTGGAAA 4710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 930989460206080