Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq43552 187 2e-41
seq44075 114 8e-20
seq27510 100 2e-15
seq43642 96.9 2e-14
>seq43552
Length=261649
Score = 187 bits (206), Expect = 2e-41
Identities = 374/547 (68%), Gaps = 8/547 (1%)
Strand=Plus/Minus
Query 474332 ATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTA 474391
||||| ||||| | || || || ||| || || | || | || |||| |||||
Sbjct 31266 ATTGGCATTGACCTGGGCACCACCTACTCCTGCGTGGGCGTCTTCCAGCATGGCAAAGTG 31207
Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451
|| || || ||||| ||||| || || | || || || |||||| | || |||||
Sbjct 31206 GAGATCATCGCCAACGACCAGGGCAACCGCACCACCCCCAGTTATGTTGCCTTCACTGAC 31147
Query 474452 ACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACT 474511
|| || | || ||||| || || || ||| | || | || || || | ||| ||
Sbjct 31146 ACCGAGCGGCTAATTGGTGACGCAGCCAAAAACCAGGTGGCCATGAACCCGGCTAACACC 31087
Query 474512 ATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGAT 474571
|| |||||||| || ||| | || || | || |||||||| | || ||||||||
Sbjct 31086 ATCTTTGATGCCAAGAGACTCATCGGGAGAAAATTTGATGACCATATCGTGCAATCTGAC 31027
Query 474572 ATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC--AA 474629
||| | ||||||||| || || || | || |||| || || | |||||| |
Sbjct 31026 ATGAAGCTTTGGCCTTTCAAAGTCATCAGTGACAGTGGCAAGCCCAAAGTAGAAGTGGAG 30967
Query 474630 TACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCA 474689
|||| |||||||| || |||| || ||| |||| || ||||||||||| | |
Sbjct 30966 TACAA--AGGTGAAATAAAGGCGTTTTATCCAGAAGAAATCTCGTCAATGGTTTTGGTTA 30909
Query 474690 AAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGA-AGTAACTGATGCAGTAATTAC 474747
| ||||| ||| || ||| | ||| |||| |||| ||| | ||||||| || ||
Sbjct 30908 AGATGAAGGAAATTGCAGAG-GCGTAT-TTGGGGAAGAGAGTGTCCAATGCAGTCATCAC 30851
Query 474748 TGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGC 474807
|| || || ||||| || || || ||||| ||||| || |||||||| ||| ||| |
Sbjct 30850 AGTCCCTGCTTATTTCAACGACTCCCAACGCCAAGCCACAAAAGATGCCGGAGTTATTTC 30791
Query 474808 AGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCT 474867
|| || ||||| | | || || ||||||||||| ||||| || |||| ||||||||
Sbjct 30790 TGGCCTGAATGTACTGAGAATCATCAATGAACCAACCGCAGCTGCTATTGCATATGGTCT 30731
Query 474868 TGATAAG 474874
|| |||
Sbjct 30730 AGACAAG 30724
Score = 163 bits (180), Expect = 2e-34
Identities = 566/871 (65%), Gaps = 14/871 (2%)
Strand=Plus/Minus
Query 475310 GGAACTCATGACGTAACTTTACTATCACTCGAAGATGGTCTTTTCTCTGTAAGAGCAACA 475369
|| ||| ||||||| | | || || | ||||||||| |||| || | ||| |||
Sbjct 30678 GGCACTTTTGACGTATCCATCCTGACAATTGAAGATGGTATTTTTGAAGTGAAAGCCACA 30619
Query 475370 GCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGT--ATCATGGTGTG 475427
|| || || |||| | || || ||||| ||||| ||| | | || | || | ||
Sbjct 30618 GCCGGCGACACACACTTGGGCGGAGAAGACTTTGACAATCGTATGGTGAAGCAC--TTTG 30561
Query 475428 TTGAAGATTTCAAGAGGAAAAATAAAGTTGATCTTT--CAACATCTGCTAAAGCATTAAG 475485
|||| || || ||||| || | || || || ||| | | | |||| | ||
Sbjct 30560 TTGATGAGTTTAAGAGAAAGCACAAGAAAGACATTAGCCAAAACAAG--AGAGCAGTGAG 30503
Query 475486 ACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTAC 475545
| || |||| ||||||||||| || ||| | | || || || || ||| | |
Sbjct 30502 GAGGCTGCGAACGGCTTGTGAACGCGCCAAGAGGACCCTATCATCCAGCACCCAAGCAAG 30443
Query 475546 TGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAA 475605
| ||| |||| ||||| | |||||||||||||| | | || || || | ||||
Sbjct 30442 CATCGAAATTGACTCTCTATATGAAGGAATTGATTTTTACACCTCAATCACTCGCGCTAG 30383
Query 475606 ATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCT 475665
||||||||| | || || ||||| || ||| | || || || || ||| | |
Sbjct 30382 ATTTGAAGAACTCAACTCAGACCTCTTCAGGGGAACGCTAGACCCTGTAGAGAAAGCTTT 30323
Query 475666 CAGAGATTCTAAACTTGACAAATCACAAG-TCCATGAAATTGTTCTTGTAGGAGGTTCAA 475724
||| | || | ||||| || |||| || | || || || || || || || || |
Sbjct 30322 ACAAGACGCCAAGATGGACAAGTC-CAAGATCAACGACATAGTCCTGGTTGGTGGATCCA 30264
Query 475725 CAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATAT-TTTAATGGTAAAAAGTTAAAT 475783
| |||||||| ||||| | || | || || | | |||||||| | |||| ||
Sbjct 30263 CGAGAATTCCCAAAATCCAAAAACTACTG-CAGGACTTCTTTAATGGAAGGGAGTTGAAC 30205
Query 475784 GAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTT- 475842
|||| | || || |||||||| || || ||||||||||| || || || ||||| |
Sbjct 30204 AAAAGCATCAACCCAGATGAAGCGGTGGCCTATGGAGCTGCGGTACAGGCTGCTATCCTG 30145
Query 475843 ATCAGGTCAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTC 475902
|| || | | | ||||| | | | | | | | || || ||||||| ||
Sbjct 30144 ATGGGGGACACCTCA-GAGAATGTCCAGGACCTCCTTTTGCTAGATGTTGCTCCACTGTC 30086
Query 475903 ATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTAT 475962
|| || ||||||||| ||||| | ||||| | || | | || || | ||
Sbjct 30085 TTTGGGCATTGAAACAGCAGGAGGAGTAATGACCGCGTTGATCAAGCGTAACACCACCAT 30026
Query 475963 CCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCAT 476022
||| |||| || | || | || ||||| || || ||||| || || ||| |||
Sbjct 30025 CCCCACCAAACAAACCCAAATCTTCTCCACCTACTCCGATAACCAGCCAGGTGTGCTCAT 29966
Query 476023 CCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAA 476082
||| | |||||||||||||| | |||||||| || ||| ||||| | ||| |
Sbjct 29965 CCAGGTGTTTGAAGGTGAAAGGGCCATGACTAAAGACAACAACCTCCTTGGCAAGTTTGA 29906
Query 476083 TCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATAT 476142
|| || || || || || || |||||||| || || ||||| || || || || ||
Sbjct 29905 CCTGACGGGGATCCCACCAGCCCCAAGAGGAGTCCCACAGATTGAGGTAACATTCGACAT 29846
Query 476143 TGATGCAAATGGTATTCTTAATGTTACTGCT 476173
||||| ||||| || || ||||| |||||
Sbjct 29845 CGATGCTAATGGCATCCTCAATGTCTCTGCT 29815
Score = 93.3 bits (102), Expect = 3e-13
Identities = 122/169 (72%), Gaps = 0/169 (0%)
Strand=Plus/Plus
Query 290825 AGACCATATGTTAATGAAGCTGCTGTTGGTTCATTTATAATTCTTAATACATCAAGACCT 290884
|||||||||| | | |||||| ||||||||||| || ||||| | ||||| || ||
Sbjct 30731 AGACCATATGCAATAGCAGCTGCGGTTGGTTCATTGATGATTCTCAGTACATTCAGGCCA 30790
Query 290885 GCAATTTTTGCCGAATCTAAAGTTGCCTGGCGTTGCGCATCATTAAAATAAGCAGGGACT 290944
| ||| | | | |||| || || |||||||| | || || |||||||||||||||
Sbjct 30791 GAAATAACTCCGGCATCTTTTGTGGCTTGGCGTTGGGAGTCGTTGAAATAAGCAGGGACT 30850
Query 290945 GTAATAACAGCTTTTTCCACTTTCTTTTTCAAATAATTTTCTGCCATTT 290993
|| || || || || |||| |||| |||||| ||||| ||||
Sbjct 30851 GTGATGACTGCATTGGACACTCTCTTCCCCAAATACGCCTCTGCAATTT 30899
>seq44075
Length=47006
Score = 114 bits (126), Expect = 8e-20
Identities = 116/151 (77%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 474726 AAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAA 474785
|||||| | |||| || | ||||| ||||| || || ||||||||||| ||||| || |
Sbjct 4601 AAGTAAATAATGCTGTTGTGACTGTGCCAGCCTACTTCAATGATTCTCAGCGTCAGGCTA 4660
Query 474786 CTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAG 474845
| |||||||| ||| ||| |||||||||||| | || ||||| ||||| |||||||
Sbjct 4661 CAAAAGATGCAGGAGTCATTTGTGGTCTTAATGTTCTTCGCATTATCAATGAGCCAACAG 4720
Query 474846 CAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876
| || || ||||||| || | || |||||
Sbjct 4721 CTGCTGCTATTGCTTACGGCTTAGACAAGAA 4751
>seq27510
Length=34911
Score = 100 bits (110), Expect = 2e-15
Identities = 130/177 (73%), Gaps = 2/177 (1%)
Strand=Plus/Plus
Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653
|| || |||| ||||| | | |||||| |||||||| ||||||||||| || | ||
Sbjct 30184 TTGTAGTCAGAGAGAGTGCGGCCATCTTCTAGTTGCTTACCAGCAAAAATCAGCCTCTGC 30243
Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713
|| |||||||| || |||||||| ||||| ||||| || || |||||| || |||
Sbjct 30244 TGGTCAGGAGGGATACCTTCCTTATCTTGGATCTTGGCCTTCACGTTTTCAATTGTGTCA 30303
Query 480714 GT-GTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| | | || || ||| || || |||||||| || || |||||||| || || ||
Sbjct 30304 CTCGGCTCAACTTCCAA-AGTGATGGTTTTACCAGTCAGGGTCTTAACAAAGATCTG 30359
>seq43642
Length=49772
Score = 96.9 bits (106), Expect = 2e-14
Identities = 91/116 (78%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 476051 ACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGA 476110
|||||||| || |||| || |||| ||| | || ||||| || |||||||| |||
Sbjct 32184 ACTAAAGACAACAACATCCTGGGAAAGTTTGAGCTCACTGGTATCCCGCCTGCTCCAAGA 32125
Query 476111 GGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGT 476166
|| || || || |||||||| || ||||| |||||||| |||||||||||||| ||
Sbjct 32124 GGTGTCCCCCAGATTGAAGTCACCTTTGACATTGATGCCAATGGTATTCTTAACGT 32069
Score = 96.9 bits (106), Expect = 2e-14
Identities = 103/135 (76%), Gaps = 1/135 (1%)
Strand=Plus/Minus
Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794
||||||| | ||||| || || || || ||||| || || || || || || |||||||
Sbjct 33329 ATGCAGTTGTAACTGTCCCTGCCTACTTCAATGACTCCCAGCGCCAGGCGACCAAAGATG 33270
Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854
| ||| ||||| || || ||||| | ||||| || ||||||||||||||||| ||
Sbjct 33269 CTGGAGCTATTGCTGGGCTGAATGTGCTGCGTATCATCAATGAACCAACAGCAGCAGCCA 33210
Query 474855 TTGCTTATGGTCTTG 474869
|||| ||||| ||||
Sbjct 33209 TTGCCTATGG-CTTG 33196
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3266177640415976
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