Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq11038 250 3e-61
seq19576 82.4 9e-11
>seq11038
Length=78219
Score = 250 bits (276), Expect = 3e-61
Identities = 949/1460 (65%), Gaps = 42/1460 (3%)
Strand=Plus/Minus
Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270
||||||| ||||| ||||| | || || | || |||||| || || ||| | |
Sbjct 23636 CCCACAGCACATGCTCATGAGAGTAGCTGTTGGAATCCACAACACTGATATAGATGCAGC 23577
Query 75271 CTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCT 75329
| | ||||| ||| || | |||| | | || ||||| ||| || | || || || |
Sbjct 23576 CATTGAGACCTACAACCTGCTGTCTGAGAAGTG-GTTCACTCATGCCTCTCCCACTCTGT 23518
Query 75330 TCAATGCTGGTACACCAA--GACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGA 75387
|||| || || |||||| |||| ||| | ||||| |||||||| | |||| |||||
Sbjct 23517 TCAACGCAGG--CACCAATAGACCCCAGCTCTCCAGCTGCTTCCTGCTGGCCATGAAGGA 23460
Query 75388 GGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGC 75447
||| || | || || |||| || || | | ||||| | ||||| || | ||
Sbjct 23459 TGACAGCATTGATGGCATTTATGATACACTCAAACAATGTGCTCTCATCTCTAAATCTGC 23400
Query 75448 TGGGGGTATTGGGAT-GCACATCCATGATGTGAGAGCCAATAAATC-TCGTATTCGGGGG 75505
|| || ||||| | ||| | || | | ||| | || | | | ||| ||
Sbjct 23399 AGGAGGGATTGGTGTAGCAGTTAGCTG-TATTAGATC-AACAGGTAGTTACATTGCTGGA 23342
Query 75506 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 75565
||||||||| | ||| |||| || | || ||||| | || | ||| ||| || |||
Sbjct 23341 ACAAATGGTAACTCAAATGGCCTTGTGCCGATGCTGAGAGTGTACAACAACACCGCACGC 23282
Query 75566 TATGTAAATCAAGCGGGGCGT---CGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGG 75622
|| || | |||| || | || ||| | | || | ||| |||| ||||||
Sbjct 23281 TACGTGGACCAAGGTGGCAATAAACGACCGGGTGCTTTTGCCATATACCTGGAGCCATGG 23222
Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTT-ACGACTCAACCAAGGTGACGAAGAGGCTCG 75681
|| ||| | | || ||||||||| | | || ||| ||| | || ||| |
Sbjct 23221 CACTTTGATGTGTTTGACTTCCTTGAGCTGAAGAAG-AACACTGGTAAAGAGGAGCAGAG 23163
Query 75682 GTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGA 75741
| |||| ||||| | |||| ||||| || || || ||||||||| |||| || |
Sbjct 23162 GGCACGAGACCTCTTCTATGCCCTATGGATCCCTGATCTGTTCATGAAGAGGGTGGAAAA 23103
Query 75742 GGGTGGTCAATGGTCTCTTTTCTGTCC-AGACAAGGCACCAGGTCTCTCCGACGCGGTGG 75800
| |||||||| | || || || | || | ||| | || | | |||
Sbjct 23102 CAACCAGGACTGGTCTCTGATGTGCCCCAGTGAGTGCCCTGGGT-TGGATGA-GTGTTGG 23045
Query 75801 GTG-AGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACT 75859
| | |||||||||| |||||||| | |||||| |||||||||||| || ||| |
Sbjct 23044 GGGGAGGAGTTTGAGAAGCTCTACACTCAATATGAACAGGAGGGTAGAGTGAA-GCGGGT 22986
Query 75860 GTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACC 75918
| | || | | | ||| ||| | || || || | || ||||| || || ||||||||
Sbjct 22985 GGTCAAGGCTCAGCAGTTGTGGTATGCCATCATCGAGTCTCAGACAGAAACAGGAACACC 22926
Query 75919 ATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAAT 75978
|| ||| | ||||| ||||| ||||||| |||||||||||| |||||||||| || ||
Sbjct 22925 TTACATGTTGTACAAAGATGCCTGTAACAGGAAGAGTAACCAGCAGAATTTGGGCACCAT 22866
Query 75979 CAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGT 76038
||| || || | ||||| || ||| | ||||| ||| || ||||| ||| ||
Sbjct 22865 CAAATGCAGTAACTTGTGCACTGAGATTGTGGAGTATACAAGCAAAGATGAAGTGGCCGT 22806
Query 76039 TTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGA 76098
|| || ||||| || || || || | |||||| | | || ||||| |||||
Sbjct 22805 CTGTAACTTGGCCTCCATTGCTCTCAACATGTATGTTACTCCGGA---ACGCACCTTTGA 22749
Query 76099 TTATGAAAAACTTCATGAAATCAC-AAAG--ATTGTTACCAAAAATCTAAACCGAGTCAT 76155
| |||| ||| |||| |||| ||||| | ||| || ||| ||||
Sbjct 22748 CTTCAAAAAGCTTGCCTCGGTCACTAAAGTAATTGT---AAGAAACCTCAACAAGATCAT 22692
Query 76156 TGACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAGACC 76212
||||| || | || || || ||| | | | || || || | ||| ||||| ||
Sbjct 22691 TGACATTAACTACTACCCAGTTCCTGAAGCAGAG---AATTCAAACAAGCGCCACAGGCC 22635
Query 76213 TATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGA 76272
|| || | ||||| || ||||| || |||| || || | || || |||||||
Sbjct 22634 AATCGGGATTGGTGTGCAGGGTCTTGCAGATGCCTTCATCCTCATGCGTTATCCATTTGA 22575
Query 76273 TTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCT 76332
||||||| || | ||||| | |||||||| ||||| || | || ||||
Sbjct 22574 AAGCCCTGAAGCCCAGCTGCTGAATATCCAGATCTTTGAGACCATCTACTATGCTGCCCT 22515
Query 76333 GGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCC 76392
|||||| || || || ||||| ||| | || | |||||||||| || |||||
Sbjct 22514 GGAGGCAAGCTGGGAGTTGGCAGAAAAAGATGGGCCTTATGAGACATACCCAGGCTCTCC 22455
Query 76393 CGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGG--AAGGTG-AAACCAAGCTCAACTA 76449
| | ||| | || |||| ||| ||||||| |||||| || |||| ||
Sbjct 22454 AGTGAGTAGAGGCATTCTGCAGTATGACATGTGGGAAAAGGTGCCCACTGAGCT---CTG 22398
Query 76450 CGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGAT 76509
|||||| | | || ||||| || | | ||| | | |||||||| ||| |
Sbjct 22397 GGACTGGAAGCTGCTTAAGGAGAAGATTGCTAAACACGGTGTGAGAAACAGTCTGTTGTT 22338
Query 76510 GGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 76569
||| || ||||| ||||||||||| |||||||| | || || ||||| | | | ||| |
Sbjct 22337 GGCCCCCATGCCCACAGCCTCCACAGCACAAATACTCGGCAACAATGAGTCCATCGAAGC 22278
Query 76570 ATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAA 76629
||||| | ||||||||| | ||| |||| | || |||||| ||||| |||
Sbjct 22277 CTACACCAGCAACATCTACACACGTAGAGTCCTCTCTGGAGAGTTTCAGATTGTAAACCC 22218
Query 76630 GCACCTCGTCAATGACCTCA 76649
|| || | || |||||||
Sbjct 22217 ACATCTGCTGAAGGACCTCA 22198
>seq19576
Length=429644
Score = 82.4 bits (90), Expect = 9e-11
Identities = 93/122 (76%), Gaps = 2/122 (2%)
Strand=Plus/Plus
Query 65089 GCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTGGTTG 65148
|| ||||| ||| ||||| || |||||||| || || || ||| ||||||||| ||
Sbjct 416901 GCATTTGCAGCTGTAGAGGGAATTTTCTTCTCTGGATCCTTTGCCGCCATTTATTGGCTG 416960
Query 65149 AAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCT-CAAATGAACTTATTTCCCGAGATGA 65207
|| ||| ||||||| ||||| || || | ||| | | ||||||||||| | |||||||
Sbjct 416961 AAAAAGAGGGGTCTAATGCCTGGGCT-TACTTATTCCAATGAACTTATCAGCAGAGATGA 417019
Query 65208 GG 65209
||
Sbjct 417020 GG 417021
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596221635866560
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