Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014- 12-02] 46,662 sequences; 679,761,122 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq11038 122 3e-22 seq15624 100 8e-16 >seq11038 Length=78219 Score = 122 bits (134), Expect = 3e-22 Identities = 506/784 (65%), Gaps = 21/784 (3%) Strand=Plus/Plus Query 155583 AGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCT-GTATTCT--ACA 155639 ||| |||| || |||| ||||| || || | | | || | ||| |||| || ||| Sbjct 22782 AGAGCAATGGAGGCCAAGTTACAGACGGC---CACTTCATCTTTGCTTGTATACTCCACA 22838 Query 155640 ATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTG 155699 |||||| ||||| |||| | ||||||||||| ||||||| ||||||| || ||| Sbjct 22839 ATCTCAGTGCACAAGTTACTGCATTTGATGGTGCCCAAATTCTGCTGGTTACTCTTCCTG 22898 Query 155700 TTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATC 155759 ||||| ||||| ||||| | ||||| || |||||||| || |||| | || | || Sbjct 22899 TTACAGGCATCTTTGTACAACATGTAAGGTGTTCCTGTTTCTGTCTGAGACTCGATGATG 22958 Query 155760 TTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTC 155819 ||| | | | || || | | || ||| || ||| ||||||| Sbjct 22959 GCATACCACAACTGCTGAGCCTTGACCACCCGCTTCACTCTACCCTCCTGTTCATATTGA 23018 Query 155820 ATATACAGCGTTCGGTAA-TCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGG 155878 | || ||| ||| || ||||| || |||| ||| || |||||||||| | ||| Sbjct 23019 GTGTAGAGC-TTCTCAAACTCCTCCCCCCAACACTCATCCAACCCAGGGCACTCACTGGG 23077 Query 155879 GCAAAACAGCGACCAAATTTTATTACCGATTACACGCTC--CATAAATACATCACTCGCC 155936 ||| | ||| ||||| | || || ||| ||| ||| || | |||| | Sbjct 23078 GCACATCAGAGACCAGTCCTGGTT--GTTTTCCACCCTCTTCATGAACAGATCAGGGATC 23135 Query 155937 CAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCC-GTGATTCTTCCGTAG 155995 || | |||||||| ||||| | |||| | |||||| | || ||| |||||| || Sbjct 23136 CATAGGGCATAGAAGAGGTCTCGTGCCCTCTGCTCCTCTTTACCAGTG-TTCTTCTTCAG 23194 Query 155996 CTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAA-CTACCAT 156054 ||| | ||| || | |||| || ||||||||| || || |||||| | || Sbjct 23195 CTCAAGGAAGTCAAACACATCAAAGTGCCATGGCTCCAGGTATATGGCAAAAGCACCCGG 23254 Query 156055 TC--CTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGG 156112 || | |||||||| || || || || || || || || ||| | || | ||||| || Sbjct 23255 TCGTTTATTGCCACCTTGGTCCACGTAGCGTGCGGTGTTGTTGTACACTCTCAGCATCGG 23314 Query 156113 AATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATT 156172 | || ||||| || | ||||| ||||| ||| | ||| | ||| | || | Sbjct 23315 CACAAGGCCATTTGAGTTACCATTTGTTCCAGCAATGTAACTACCTGTTGATCTAATACA 23374 Query 156173 ATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGT 156232 || || ||||| || |||| ||||||| || |||| |||| || | || Sbjct 23375 GCTAACTGCTACACCAATCCCTCCTGCAGATTTAGAGATGAGAGCACATTGTTTGAGTGT 23434 Query 156233 ATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTG 156292 || |||| || ||||| ||||| | ||| | || || |||| | || Sbjct 23435 ATCATAAATGCCATCAATGCTGTCATCCTTCATGGCCAGCAGGAAGCAGCTGGAGAGCTG 23494 Query 156293 AGGTC--GTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTA 156350 |||| ||||| || |||||||| || || || | |||||| | || |||| | | Sbjct 23495 GGGTCTATTGGTG--CCTGCGTTGAACAGAGTGGGAGAGGCATGAGTGAACCACTTCTCA 23552 Query 156351 GACA 156354 |||| Sbjct 23553 GACA 23556 >seq15624 Length=12484 Score = 100 bits (110), Expect = 8e-16 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 155629 TGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGT 155688 ||||||||||||||||| ||||||||| ||||||||||||| ||||| ||||| Sbjct 11853 TGTATTCTACAATCTCAGTGCACAGGTTGCTGGATTTGATGGTGCCTAGATTCTGCTGGT 11912 Query 155689 TAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTG 155748 | || || || || ||||| ||||| || ||||||||||| || ||||| |||||| Sbjct 11913 TGCTCTTCCTATTGCATGCATCTTTGTAGAGCATGTATGGGGTACCCGTCTCTGTCTGTG 11972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1470937663729094