Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq11038 122 3e-22
seq15624 100 8e-16
>seq11038
Length=78219
Score = 122 bits (134), Expect = 3e-22
Identities = 506/784 (65%), Gaps = 21/784 (3%)
Strand=Plus/Plus
Query 155583 AGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCT-GTATTCT--ACA 155639
||| |||| || |||| ||||| || || | | | || | ||| |||| || |||
Sbjct 22782 AGAGCAATGGAGGCCAAGTTACAGACGGC---CACTTCATCTTTGCTTGTATACTCCACA 22838
Query 155640 ATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTG 155699
|||||| ||||| |||| | ||||||||||| ||||||| ||||||| || |||
Sbjct 22839 ATCTCAGTGCACAAGTTACTGCATTTGATGGTGCCCAAATTCTGCTGGTTACTCTTCCTG 22898
Query 155700 TTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATC 155759
||||| ||||| ||||| | ||||| || |||||||| || |||| | || | ||
Sbjct 22899 TTACAGGCATCTTTGTACAACATGTAAGGTGTTCCTGTTTCTGTCTGAGACTCGATGATG 22958
Query 155760 TTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTC 155819
||| | | | || || | | || ||| || ||| |||||||
Sbjct 22959 GCATACCACAACTGCTGAGCCTTGACCACCCGCTTCACTCTACCCTCCTGTTCATATTGA 23018
Query 155820 ATATACAGCGTTCGGTAA-TCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGG 155878
| || ||| ||| || ||||| || |||| ||| || |||||||||| | |||
Sbjct 23019 GTGTAGAGC-TTCTCAAACTCCTCCCCCCAACACTCATCCAACCCAGGGCACTCACTGGG 23077
Query 155879 GCAAAACAGCGACCAAATTTTATTACCGATTACACGCTC--CATAAATACATCACTCGCC 155936
||| | ||| ||||| | || || ||| ||| ||| || | |||| |
Sbjct 23078 GCACATCAGAGACCAGTCCTGGTT--GTTTTCCACCCTCTTCATGAACAGATCAGGGATC 23135
Query 155937 CAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCC-GTGATTCTTCCGTAG 155995
|| | |||||||| ||||| | |||| | |||||| | || ||| |||||| ||
Sbjct 23136 CATAGGGCATAGAAGAGGTCTCGTGCCCTCTGCTCCTCTTTACCAGTG-TTCTTCTTCAG 23194
Query 155996 CTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAA-CTACCAT 156054
||| | ||| || | |||| || ||||||||| || || |||||| | ||
Sbjct 23195 CTCAAGGAAGTCAAACACATCAAAGTGCCATGGCTCCAGGTATATGGCAAAAGCACCCGG 23254
Query 156055 TC--CTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGG 156112
|| | |||||||| || || || || || || || || ||| | || | ||||| ||
Sbjct 23255 TCGTTTATTGCCACCTTGGTCCACGTAGCGTGCGGTGTTGTTGTACACTCTCAGCATCGG 23314
Query 156113 AATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATT 156172
| || ||||| || | ||||| ||||| ||| | ||| | ||| | || |
Sbjct 23315 CACAAGGCCATTTGAGTTACCATTTGTTCCAGCAATGTAACTACCTGTTGATCTAATACA 23374
Query 156173 ATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGT 156232
|| || ||||| || |||| ||||||| || |||| |||| || | ||
Sbjct 23375 GCTAACTGCTACACCAATCCCTCCTGCAGATTTAGAGATGAGAGCACATTGTTTGAGTGT 23434
Query 156233 ATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTG 156292
|| |||| || ||||| ||||| | ||| | || || |||| | ||
Sbjct 23435 ATCATAAATGCCATCAATGCTGTCATCCTTCATGGCCAGCAGGAAGCAGCTGGAGAGCTG 23494
Query 156293 AGGTC--GTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTA 156350
|||| ||||| || |||||||| || || || | |||||| | || |||| | |
Sbjct 23495 GGGTCTATTGGTG--CCTGCGTTGAACAGAGTGGGAGAGGCATGAGTGAACCACTTCTCA 23552
Query 156351 GACA 156354
||||
Sbjct 23553 GACA 23556
>seq15624
Length=12484
Score = 100 bits (110), Expect = 8e-16
Identities = 94/120 (78%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 155629 TGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGT 155688
||||||||||||||||| ||||||||| ||||||||||||| ||||| |||||
Sbjct 11853 TGTATTCTACAATCTCAGTGCACAGGTTGCTGGATTTGATGGTGCCTAGATTCTGCTGGT 11912
Query 155689 TAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTG 155748
| || || || || ||||| ||||| || ||||||||||| || ||||| ||||||
Sbjct 11913 TGCTCTTCCTATTGCATGCATCTTTGTAGAGCATGTATGGGGTACCCGTCTCTGTCTGTG 11972
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1470937663729094
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |