Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq11038 118 1e-21
seq27510 107 2e-18
>seq11038
Length=78219
Score = 118 bits (130), Expect = 1e-21
Identities = 492/762 (65%), Gaps = 36/762 (5%)
Strand=Plus/Plus
Query 138483 GTCGTTTATCAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTA 138542
||| || | ||||| | ||||| | |||||| || || | | |||| ||| |||
Sbjct 22202 GTCCTTCAGCAGATGTGGGTTTACAATCTGAAACTCTCCAGAGAGGACTCTACGTGTGTA 22261
Query 138543 AATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGC 138602
|||||| ||||| | | || | || || ||||| || || || || || |||| ||
Sbjct 22262 GATGTTGCTGGTGTAGGCTTCGATGGACTCATTGTTGCCGAGTATTTGTGCTGTGGAGGC 22321
Query 138603 GGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGA--AGCTTGATTCGTTCC 138660
|| |||||| |||| ||| ||| || | | |||||| ||| ||| |||
Sbjct 22322 TGTGGGCATGGGGGCCAACAACAGACTGTTTCTCACACCGTGTTTAGCAATCTTC--TCC 22379
Query 138661 TTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAAC 138720
|| ||| | ||||||||| | || | || || | |||||| || ||||| |
Sbjct 22380 TTAAGCAGCTTCCAGTCCCAGAGCTCAGTGGGCACCTTTTCCCACATGTCATACTGCAGA 22439
Query 138721 ATTCCCAAACTTGCGGGACTGCCTTCGTACGAATCGTATACACCAAACTCTTGC-GCCAA 138779
|| || ||| | ||| |||| ||| | || || | || | || || | |||||
Sbjct 22440 ATGCCTCTACTCACTGGAGAGCCTGGGTATGTCTCATA-AGGCCCATCTTTTTCTGCCAA 22498
Query 138780 CTCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAA 138839
||| ||| ||||| || ||| ||||||| || || || ||||| ||| ||||
Sbjct 22499 CTCCCAGCTTGCCTCCAGGGCAGCATAGTAGATGGTCTCAAAGATCTGGATATTCAGCAG 22558
Query 138840 TCGGGCCTCGGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTG 138899
|||| || | ||| || | || || | | |||| || || || || || ||
Sbjct 22559 CTGGGCTTCAGGGCTTTCAAATGGATAACGCATGAGGATGAAGGCATCTGCAAGACCCTG 22618
Query 138900 CACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCGGCTTCGATA---GG 138956
||| || | |||| || | |||||| ||||| || | ||||| | ||
Sbjct 22619 CACACCAATCCCGATTGGCCTGTGGCGCTTGTTTGAA---TTCTCTGCTTCAGGAACTGG 22675
Query 138957 ATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGT--CGTATGC 139014
|| ||||| | || ||||| ||||| | |||| || | || ||||| | | ||
Sbjct 22676 GTAGTAGTTAATGTCAATGATCTTGTTGAGGTTTCTTACAATTACTTTAGTGACCGAGGC 22735
Query 139015 TTTAATCGTTCAAAA-TCGTATGTGCCCCCGTTGTCGTCGACGACGTCGACAAATTTGTT 139073
|| | || || || | |||| || || || || ||| | ||||
Sbjct 22736 ---AAGCTTTTTGAAGTCAAAGGTGC-------GT--TC--CGGAGTA-ACATACATGTT 22780
Query 139074 GACACAAATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCT-GTAT--TCGAC 139130
|| | ||| ||||| | ||| || || |||||||| || | ||| |||| || ||
Sbjct 22781 GAGAGCAATGGAGGCCAAGTTACAGACGGCCACTTCATCT---TTGCTTGTATACTCCAC 22837
Query 139131 AATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCG 139190
||| || | ||||| ||||| || ||||| || || ||||| || || || || || |
Sbjct 22838 AATCTCAGTGCACAAGTTACTGCATTTGATGGTGCCCAAATTCTGCTGGTTACTCTTCCT 22897
Query 139191 GTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTC 139232
|||||| ||||||||||| | ||| || ||||| || |||||
Sbjct 22898 GTTACAGGCATCTTTGTACAACATGTAAGGTGTTCCTGTTTC 22939
>seq27510
Length=34911
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| |||| || || || |||||||| || || | ||||| || | |
Sbjct 30362 ATGCAGATCTTTGTTAAGACCCTGACTGGTAAAACCATCACTTTGGAAGTTGAGCCGAGT 30303
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|||||| | |||| || || ||||||||||| || ||||| || ||||| || ||
Sbjct 30302 GACACAATTGAAAACGTGAAGGCCAAGATCCAAGATAAGGAAGGTATCCCTCCTGACCAG 30243
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||| ||||| || || || || || ||| | | | || || || |||
Sbjct 30242 CAGAGGCTGATTTTTGCTGGTAAGCAACTAGAAGATGGCCGCACTCTCTCTGACTACAAC 30183
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||||| || || || ||||||||| | || || | |||||
Sbjct 30182 ATCCAGAAGGAGTCCACCCTCCACTTGGTGCTACGTCTGAGAGGAGG 30136
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449635185977360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |