Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014- 12-02] 46,662 sequences; 679,761,122 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq27510 129 4e-25 >seq27510 Length=34911 Score = 129 bits (142), Expect = 4e-25 Identities = 169/232 (73%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 34748 TTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCC 34807 |||||||| ||||| | ||| |||| ||| | |||| |||||||||||||| ||||| Sbjct 29905 TTTCCTCCTCTCAAACGCAGCACCAAGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCA 29964 Query 34808 GATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGC 34867 || ||| |||| |||| || || ||||| || ||||| ||||| | |||||||| | Sbjct 29965 GAGAGGGTGCGACCATCTTCAAGCTGCTTACCAGCGAAAATCAGCCTCTGCTGGTCAGGA 30024 Query 34868 GGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCT 34925 || | ||||| ||||| | || ||| ||||| || || || | ||| | | | Sbjct 30025 GGGATACCCTCTTTGTCCTGGATCTTTGCCTTGAC--ATTCTCAATGGTGTCACTAGGTT 30082 Query 34926 CGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || || | || |||||||| || || |||||||| ||||| || ||||| Sbjct 30083 CCACTTCCAAAGTGATGGTCTTCCCAGTCAGGGTCTTCACAAAAATTTGCAT 30134 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| |||| | || |||| ||| | |||| ||||||||| ||||| ||||| || Sbjct 30136 CCTCCTCTCAGACGTAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 30195 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| || |||||||| || || || ||||| | |||||||| | || Sbjct 30196 AGAGTGCGGCCATCTTCTAGTTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCAGGAGGG 30255 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || ||||| || | || || || ||| | | || | ||| | | ||| || Sbjct 30256 ATACCTTCCTTATCTTGGATCTTGGCCTTCACGTTTTCAATTGTGTCACTCGGCTCAACT 30315 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | || ||||| || || || |||||||| |||||||||||||| Sbjct 30316 TCCAAAGTGATGGTTTTACCAGTCAGGGTCTTAACAAAGATCTGCAT 30362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325507580743778