Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq27510 187 5e-42
seq44590 109 1e-18
seq31826 100 6e-16
seq34043 96.9 7e-15
>seq27510
Length=34911
Score = 187 bits (206), Expect = 5e-42
Identities = 178/228 (78%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|||||||||| ||| || || ||||| || || || || ||||| || || || |||||
Sbjct 30136 CCTCCTCTCAGACGTAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 30195
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
||| | | || ||||||||||| || |||||||| || || || || || || |||||
Sbjct 30196 AGAGTGCGGCCATCTTCTAGTTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCAGGAGGG 30255
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| |||||||||||||| ||||| || || || |||||||| || ||| | || || |||
Sbjct 30256 ATACCTTCCTTATCTTGGATCTTGGCCTTCACGTTTTCAATTGTGTCACTCGGCTCAACT 30315
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
|||||||| || || || || |||| ||||| ||||| |||||||||
Sbjct 30316 TCCAAAGTGATGGTTTTACCAGTCAGGGTCTTAACAAAGATCTGCATT 30363
Score = 179 bits (198), Expect = 7e-40
Identities = 176/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
||||||||||||||||| || ||||| || || ||||| ||||| || || || |||||
Sbjct 29908 CCTCCTCTCAAACGCAGCACCAAGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCAGAG 29967
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | ||| ||||| || || || ||||| || || || || || || || |||||
Sbjct 29968 AGGGTGCGACCATCTTCAAGCTGCTTACCAGCGAAAATCAGCCTCTGCTGGTCAGGAGGG 30027
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| || || || || || |||||||| || ||||| ||||| || ||| ||||||| |||
Sbjct 30028 ATACCCTCTTTGTCCTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTAGGTTCCACT 30087
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| || ||||| || |||| ||||| ||||| || |||||
Sbjct 30088 TCCAAAGTGATGGTCTTCCCAGTCAGGGTCTTCACAAAAATTTGCAT 30134
>seq44590
Length=141216
Score = 109 bits (120), Expect = 1e-18
Identities = 117/155 (75%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 60155 TGGTGGTACTATATATCTAAAGGTATAGAATACTTAGATACGGTGTTTTTCATACTTAGG 60214
|||||||||| | | |||||||| || |||||| | || || ||||||||||| || ||
Sbjct 1341 TGGTGGTACTTTGTCTCTAAAGGCATTGAATACCTGGACACAGTGTTTTTCATTCTGAGA 1282
Query 60215 AAAAAGTTTAATCAGGTTAGTTTTTTACACGTATATCATCATTTTACTATGTTTACTTTA 60274
|||||||| || || |||| ||| || || || || || || | || ||||| ||| |
Sbjct 1281 AAAAAGTTCAACCAAGTTACTTTCTTGCATGTGTACCACCACTGCACCATGTTCACTCTG 1222
Query 60275 GGATGGGTAGGCATTAAATGGTTTGCCGGAGGTCA 60309
| ||| | ||||| |||||| | || ||||| ||
Sbjct 1221 TGGTGGATCGGCATCAAATGGGTAGCAGGAGGACA 1187
>seq31826
Length=1572
Score = 100 bits (110), Expect = 6e-16
Identities = 99/128 (77%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 82683 AGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCA 82742
|| || || |||||||| || || || ||||||||||||||||| ||||| |||||||||
Sbjct 2 AGCCTCTGCTGATCTGGGGGAATGCCCTCCTTATCTTGAATCTTGGCTTTAACATTTTCA 61
Query 82743 ATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAAT 82802
|| || ||| | || || || || | || || || ||||| || | || || |||||
Sbjct 62 ATAGTGTCACTGGGCTCCACCTCAAGGGTAATGGTTTTGCCAGTGAGGGTTTTCACAAAG 121
Query 82803 ATCTGCAT 82810
||||||||
Sbjct 122 ATCTGCAT 129
>seq34043
Length=9316
Score = 96.9 bits (106), Expect = 7e-15
Identities = 124/171 (73%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 60139 GATAGCCAGAGCATTATGGTGGTACTATATATCTAAAGGTATAGAATACTTAGATACGGT 60198
||||||| ||| | ||||||||||| || |||||||| | || | | || || ||
Sbjct 8444 GATAGCCTCAGCTCTTTGGTGGTACTACATTTCTAAAGGAGTGGAGTTTCTGGACACTGT 8385
Query 60199 GTTTTTCATACTTAGGAAAAAGTTTAATCAGGTTAGTTTTTTACACGTATATCATCATTT 60258
|||||||| | ||||||||||| || || || || ||| |||| || || ||||| |
Sbjct 8384 ATTTTTCATTTTGAGGAAAAAGTTCAACCAAGTAAGCTTTCTACATGTCTACCATCACTG 8325
Query 60259 TACTATGTTTACTTTAGGATGGGTAGGCATTAAATGGTTTGCCGGAGGTCA 60309
|| ||||| | || | ||| | ||||| |||||| | ||||||| ||
Sbjct 8324 CACCATGTTCATCTTGTGGTGGATTGGCATCAAATGGGTCCCCGGAGGACA 8274
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981240207858418
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |