Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014- 12-02] 46,662 sequences; 679,761,122 total letters Query= NC_024696.1 Length=180800 Score E Sequences producing significant alignments: (Bits) Value seq22661 111 2e-19 >seq22661 Length=34502 Score = 111 bits (122), Expect = 2e-19 Identities = 239/350 (68%), Gaps = 12/350 (3%) Strand=Plus/Plus Query 176946 GCCAGTTCTATAGGGGACGTGTAGTCGTTCACGTGAATGAAAGCGTCTCCCGGGACGTAA 177005 ||||| ||| | || || || |||||| ||| || ||||| ||||||||| ||| | | Sbjct 7528 GCCAGCTCTTTGGGTGAGCTGAAGTCGTCCACATGGATGAAGGCGTCTCCCTGGAGGAAG 7587 Query 177006 TTTTCGTAATTCTCTCTCGATGTTCCGAGTACTATGGGTACCGCACCTGCCATAAGAGAT 177065 || ||||| |||| || | | ||| || || | ||| || | |||| | || | Sbjct 7588 TTCTCGTAGTTCTGCCTGGGGGGTCCCAGGACCACGGGCACTGTG---GCCACA-GACAG 7643 Query 177066 CGG----TAGAGTTTTTCGGTAATATAGTCCCTGTGTACGGAGTTCTCAAACGCGAGATA 177121 ||| || ||||| || || || ||||| |||| | |||||||||||| || || || Sbjct 7644 CGGGTTGTACAGTTTCTCTGTGATGTAGTCTTTGTGGATGGAGTTCTCAAAGGCCAGGTA 7703 Query 177122 GAATTTACAGGAAGATAGTAGCGGG-ATGAAGTCATCATCGGGTATATAATCTCCTACTA 177180 ||| |||||| | | | | ||| | | |||| | |||| || || ||||| | Sbjct 7704 GAACTTACAGCTGGCCA-TGGTGGGAAAGTAGTCCTGGTCGGAGATGTACTCTCCAAAGG 7762 Query 177181 CGTTCCCGTATACATGTATATCTATGTGTTTACTGAGCTCTAGGTAGTATCTCGA-TCTC 177239 | | || || | || | || ||||| || ||||| ||| || || || | | Sbjct 7763 CCTGTCCATAGGCGTGCACCTCGATGTGCTTGTACAGCTCGTTGTAATA-CTTGACCCGC 7821 Query 177240 ACGTGGTCGTTGTTCCAATTGCTGACGACCCAGCAAACTAACTTGCTCTT 177289 |||||||| | |||||| |||||||||| |||||| | | |||| |||| Sbjct 7822 ACGTGGTCCTGGTTCCAGTTGCTGACGATCCAGCAGATGAGCTTGTTCTT 7871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578094615075200