Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq24268 102 3e-18
seq8565 102 3e-18
seq26031 100 9e-18
seq11690 100 9e-18
seq42998 98.7 3e-17
seq42741 98.7 3e-17
seq42393 98.7 3e-17
seq24923 98.7 3e-17
seq40508 78.8 3e-11
>seq24268
Length=1663
Score = 102 bits (112), Expect = 3e-18
Identities = 70/79 (89%), Gaps = 0/79 (0%)
Strand=Plus/Plus
Query 2762 GTTTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGG 2821
|| ||| || ||| |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1012 GTATATAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGG 1071
Query 2822 TTCAACCCCGGGCTTCAGC 2840
||| | |||||| ||| ||
Sbjct 1072 TTCGATCCCGGGTTTCGGC 1090
>seq8565
Length=22446
Score = 102 bits (112), Expect = 3e-18
Identities = 68/76 (89%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 2765 TATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC 2824
||| || ||| |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 6787 TATAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTC 6728
Query 2825 AACCCCGGGCTTCAGC 2840
|| || ||| ||| ||
Sbjct 6727 AATCCTGGGTTTCGGC 6712
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 2406 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 2465
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 2466 CCGGGTTTCGGC 2477
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 5208 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 5149
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 5148 CCGGGTTTCGGC 5137
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 10019 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 10078
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 10079 CCGGGTTTCGGC 10090
Score = 95.1 bits (104), Expect = 4e-16
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 3218 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 3277
Query 2829 CCGGGCTTCAGC 2840
| ||| ||| ||
Sbjct 3278 CTGGGTTTCGGC 3289
>seq26031
Length=12495
Score = 100 bits (110), Expect = 9e-18
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 1802 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAT 1743
Query 2828 CCCGGGCTTCAGC 2840
|||||| ||| ||
Sbjct 1742 CCCGGGTTTCGGC 1730
>seq11690
Length=65624
Score = 100 bits (110), Expect = 9e-18
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 41991 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAT 41932
Query 2828 CCCGGGCTTCAGC 2840
|||||| ||| ||
Sbjct 41931 CCCGGGTTTCGGC 41919
>seq42998
Length=53288
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 3906 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 3847
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 3846 CCGGGTTTCGGC 3835
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 11342 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 11283
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 11282 CCGGGTTTCGGC 11271
Score = 95.1 bits (104), Expect = 4e-16
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|||||| |||||||||||||||||| ||||||||||||||||||||||||||||| | |
Sbjct 10231 GCTGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTTGATC 10172
Query 2829 CCGGGCTTCAGC 2840
|| || ||| ||
Sbjct 10171 CCAGGTTTCGGC 10160
>seq42741
Length=43522
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 43355 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 43414
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 43415 CCGGGTTTCGGC 43426
>seq42393
Length=165900
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 150139 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 150198
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 150199 CCGGGTTTCGGC 150210
>seq24923
Length=2148
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 147 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 206
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 207 CCGGGTTTCGGC 218
>seq40508
Length=28065
Score = 78.8 bits (86), Expect = 3e-11
Identities = 84/107 (79%), Gaps = 8/107 (7%)
Strand=Plus/Plus
Query 2734 GCATGATACAATGACATCTTTGTACTGTGTTTATGGCTGAAGTAGCTCAGTTGGGAGAGC 2793
|||| |||||||||||| |||| | | || || || |||||||| |||||| ||
Sbjct 17350 GCAT-ATACAATGACAT--TTGT-CAGGCTT----GCCAAAATAGCTCAGCTGGGAGCGC 17401
Query 2794 ATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGGCTTCAGC 2840
|| ||||||||||||||||| ||||||||||| || ||| ||| ||
Sbjct 17402 GTTGGACTGAAGATCTAAAGGGCCCTGGTTCAATCCTGGGTTTCGGC 17448
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15841510908990
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |