Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq13632 188 1e-41
seq12728 181 2e-39
seq13138 179 5e-39
seq6917 179 5e-39
seq22890 172 8e-37
seq17965 172 8e-37
seq10525 149 9e-30
seq28053 136 6e-26
seq7998 132 7e-25
seq23246 107 3e-17
seq44951 102 1e-15
seq5499 89.7 7e-12
>seq13632
Length=2547
Score = 188 bits (208), Expect = 1e-41
Identities = 180/229 (79%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| |||| |||| ||| |||| |||||
Sbjct 924 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 871
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| |||||||||||||| | || ||||||||| |||||| |||
Sbjct 870 AGCATCATGAACTCTTTTGTCAACGACATCTTTGAGCGCATCGGCGGAGAGGCCTCCCGC 811
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| ||| ||| | | | |||||||||||||||||||||
Sbjct 810 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCCGTGCGC 751
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 750 CTCCTGCTGCCCGGAGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 702
>seq12728
Length=18623
Score = 181 bits (200), Expect = 2e-39
Identities = 177/227 (78%), Gaps = 6/227 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| |||| |||| ||| |||| |||||
Sbjct 1635 TACAAGGTGCTGAAGCAGGTTCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 1688
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| |||||||||||||| | || ||||||||| |||||| |||
Sbjct 1689 AGCATCATGAACTCTTTTGTCAACGACATCTTTGAGCGCATCGGCGGAGAGGCCTCCCGC 1748
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| ||| ||| | | | |||||||||||||||||||||
Sbjct 1749 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCCGTGCGC 1808
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
|| | ||| ||| || ||||||| ||||||||| || ||||||||
Sbjct 1809 CTCCTGCTGCCCGGAGAGCTGGCCAAGCACGCCGTGTCTGAGGGCAC 1855
>seq13138
Length=12877
Score = 179 bits (198), Expect = 5e-39
Identities = 178/229 (78%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| |||| |||| ||| |||| |||||
Sbjct 908 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 855
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| | |||||| |||||| |||
Sbjct 854 AGCATCATGAACTCCTTCGTCAACGACATCTTCGAGAGGATCGGCGGAGAGGCCTCCCGC 795
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| ||| ||| | | | |||||||||||||||||||||
Sbjct 794 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCCGTGCGC 735
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 734 CTCCTGCTGCCCGGAGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 686
>seq6917
Length=20139
Score = 179 bits (198), Expect = 5e-39
Identities = 178/229 (78%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| |||| |||| ||| |||| |||||
Sbjct 373 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 320
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| | |||||| |||||| |||
Sbjct 319 AGCATCATGAACTCCTTCGTCAACGACATCTTCGAGAGGATCGGCGGAGAGGCCTCCCGC 260
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| ||| ||| | | | |||||||||||||||||||||
Sbjct 259 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCCGTGCGC 200
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 199 CTCCTGCTGCCCGGAGATCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 151
>seq22890
Length=4053
Score = 172 bits (190), Expect = 8e-37
Identities = 175/227 (77%), Gaps = 6/227 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| |||| |||| ||| |||| |||||
Sbjct 3790 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 3737
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| |||||||||||||| | || ||||||||| |||||| |||
Sbjct 3736 AGCATCATGAACTCTTTTGTCAACGACATCTTTGAGCGCATCGGCGGAGAGGCCTCCCGC 3677
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| ||| ||| | | | |||||||||||||||||||||
Sbjct 3676 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCCGTGCGC 3617
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
|| | ||| ||| || ||||||| |||||| || || ||||| ||
Sbjct 3616 CTCCTGCTGCCCGGAGAGCTGGCCAAGCACGCTGTGTCTGAGGGTAC 3570
>seq17965
Length=24390
Score = 172 bits (190), Expect = 8e-37
Identities = 175/227 (77%), Gaps = 6/227 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| |||| |||| ||| || |||||
Sbjct 21432 TACAAGGTGCTGAAGCAGGTTCACCCCGACACCGG-----CATC-TCCTCTAAAGCCATG 21485
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| |||||||||||||| | || ||||||||| |||||| |||
Sbjct 21486 AGCATCATGAACTCTTTTGTCAACGACATCTTTGAGCGCATCGGCGGAGAGGCCTCCCGC 21545
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| ||| ||| | | | |||||||||||||||||||||
Sbjct 21546 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCCGTGCGC 21605
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
|| | ||| ||| || ||||||| ||||||||| || ||||||||
Sbjct 21606 CTCCTGCTGCCCGGAGAGCTGGCCAAGCACGCCGTGTCTGAGGGCAC 21652
>seq10525
Length=65857
Score = 149 bits (164), Expect = 9e-30
Identities = 170/227 (75%), Gaps = 6/227 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
|||||||||||||||||||| |||||| |||| | ||| ||| |||| |||||
Sbjct 4648 TACAAGGTGCTCAAGCAGGTCCACCCCGACACCGGT-----ATC-TCCTCCAAGGCCATG 4595
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| | |||||| ||||| |||
Sbjct 4594 AGCATCATGAACTCCTTCGTCAACGACATCTTCGAGAGGATCGGCGGAGAGGCTTCCCGC 4535
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| ||| ||| | | | |||||||||||||| ||||||
Sbjct 4534 CTGGCGCATTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCTGTGCGC 4475
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
|| | ||| ||| || |||||| |||||||| || || |||||
Sbjct 4474 CTCCTGCTGCCCGGAGAGTTGGCCAAACACGCCGTGTCTGAAGGCAC 4428
>seq28053
Length=77842
Score = 136 bits (150), Expect = 6e-26
Identities = 168/227 (74%), Gaps = 6/227 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||| ||||| || ||||| || ||| || ||| |||| ||| |||| | |||
Sbjct 70943 TACAAAGTGCTAAAACAGGTCCATCCCGACAC---TGG--CATC-TCCTCCAAGGCAATG 70890
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| | |||||| ||||| ||||
Sbjct 70889 AGCATCATGAACTCCTTCGTCAACGACATCTTCGAGAGGATCGGCGGTGAGGCTTCTCGC 70830
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || ||||||||| ||| ||| | | | ||||| ||||||||||||||
Sbjct 70829 CTGGCGCACTATAACAAGCGCTCCACCATCACCTCCAGGGAGATTCAGACCGCCGTGCGT 70770
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
|| | ||| ||| || ||||||| |||||| || ||||| |||||
Sbjct 70769 CTTTTGTTGCCCGGAGAGCTGGCCAAGCACGCAGTGTCCGAAGGCAC 70723
>seq7998
Length=12346
Score = 132 bits (146), Expect = 7e-25
Identities = 167/229 (73%), Gaps = 13/229 (6%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||| ||| |||||| |||| |||| ||| |||| ||||
Sbjct 4674 TACAAGGTGCTGAAGCTGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGACCATA 4727
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||| || ||| | |||||| ||||||
Sbjct 4728 AGCATCATGAACTCCTTCATCAACGATATCTTCGTGAGGATCGGCGGAGAGGCC------ 4781
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
|||||| || |||||||||| ||| ||| | | | |||||||||||||||||||||
Sbjct 4782 -TGGCGCACTACAACAAGCGCTCCACCATCACCTCCGGGGAGATCCAGACCGCCGTGCGC 4840
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|| | || ||| || ||||||| |||||||| |||||||||||||
Sbjct 4841 CTCCTGCTGTCCGGAGAGCTGGCCAAACACGCCGTGTCCGAGGGCACCA 4889
>seq23246
Length=13328
Score = 107 bits (118), Expect = 3e-17
Identities = 128/174 (74%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 724969 CCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCG 725028
||||| ||||||||||| || || || ||| | |||| | |||| ||| || ||
Sbjct 5452 CCATGAGCATCATGAACTCCTTCGTGAATGACCTTTTCGAGAGGATCGCCACGGAAGCGT 5511
Query 725029 GTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCG 725088
|| | |||| | ||||||||||| ||| ||| || || ||| | ||||| || |
Sbjct 5512 CCCGTTTAGCGCAGTACAACAAGCGCAGCACCATCACCAGCCGAGAGGTGCAGACTGCGG 5571
Query 725089 TGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
| || ||| || ||| ||| |||||||||| |||||||| |||||||||||||
Sbjct 5572 TCCGGCTGCTCCTGCCCGGGGAACTGGCCAAACACGCCGTGTCCGAGGGCACCA 5625
>seq44951
Length=25968
Score = 102 bits (112), Expect = 1e-15
Identities = 122/166 (73%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 724977 ATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTG 725036
||||||||||| ||||||||| | || | || |||||||| ||| || | ||||
Sbjct 4841 ATCATGAACTCTTTTGTCAACAAAATCTTTGAGCGCATCGGTGGAGAGACCTCCCTCCTG 4782
Query 725037 GCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTG 725096
| | || ||||||| || ||| ||| | | | |||||||||||||| ||||||||
Sbjct 4781 GAACACTACAACAAGTGCTCCACCATCACCTCCAGGGAGATCCAGACCGCTGTGCGCCTC 4722
Query 725097 ATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
| ||| || || ||||||| ||| |||| || ||||||||||
Sbjct 4721 CTGCTGCCTGGAGAGCTGGCCAAGCATTCCGTGTCTGAGGGCACCA 4676
>seq5499
Length=1901
Score = 89.7 bits (98), Expect = 7e-12
Identities = 90/117 (77%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011
||||| ||| ||||||| || | | ||||| || | || |||||||||||||||||
Sbjct 1532 CGCTTCATGCAAGAGGTGCAGGTAACGGAGGCGCGCTGCTTCTACGGGTTCCAGATCGCG 1591
Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGAC 1456068
|| || ||||||||||| || | ||| || || ||||||||||| ||||||||
Sbjct 1592 ATGGAGAACATCCACTCGGAGATGTACAGCCTGCTCATCGACACCTATATCAAGGAC 1648
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7173310564335244
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |