Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014- 12-02] 46,662 sequences; 679,761,122 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq13632 188 1e-41 seq12728 181 2e-39 seq13138 179 5e-39 seq6917 179 5e-39 seq22890 172 8e-37 seq17965 172 8e-37 seq10525 149 9e-30 seq28053 136 6e-26 seq7998 132 7e-25 seq23246 107 3e-17 seq44951 102 1e-15 seq5499 89.7 7e-12 >seq13632 Length=2547 Score = 188 bits (208), Expect = 1e-41 Identities = 180/229 (79%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| |||||| |||| |||| ||| |||| ||||| Sbjct 924 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 871 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| |||||||||||||| | || ||||||||| |||||| ||| Sbjct 870 AGCATCATGAACTCTTTTGTCAACGACATCTTTGAGCGCATCGGCGGAGAGGCCTCCCGC 811 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | | | ||||||||||||||||||||| Sbjct 810 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCCGTGCGC 751 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| ||| || ||||||| ||||||||| ||||||||||||| Sbjct 750 CTCCTGCTGCCCGGAGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 702 >seq12728 Length=18623 Score = 181 bits (200), Expect = 2e-39 Identities = 177/227 (78%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| |||||| |||| |||| ||| |||| ||||| Sbjct 1635 TACAAGGTGCTGAAGCAGGTTCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 1688 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| |||||||||||||| | || ||||||||| |||||| ||| Sbjct 1689 AGCATCATGAACTCTTTTGTCAACGACATCTTTGAGCGCATCGGCGGAGAGGCCTCCCGC 1748 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | | | ||||||||||||||||||||| Sbjct 1749 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCCGTGCGC 1808 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 || | ||| ||| || ||||||| ||||||||| || |||||||| Sbjct 1809 CTCCTGCTGCCCGGAGAGCTGGCCAAGCACGCCGTGTCTGAGGGCAC 1855 >seq13138 Length=12877 Score = 179 bits (198), Expect = 5e-39 Identities = 178/229 (78%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| |||||| |||| |||| ||| |||| ||||| Sbjct 908 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 855 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| | |||||| |||||| ||| Sbjct 854 AGCATCATGAACTCCTTCGTCAACGACATCTTCGAGAGGATCGGCGGAGAGGCCTCCCGC 795 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | | | ||||||||||||||||||||| Sbjct 794 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCCGTGCGC 735 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| ||| || ||||||| ||||||||| ||||||||||||| Sbjct 734 CTCCTGCTGCCCGGAGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 686 >seq6917 Length=20139 Score = 179 bits (198), Expect = 5e-39 Identities = 178/229 (78%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| |||||| |||| |||| ||| |||| ||||| Sbjct 373 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 320 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| | |||||| |||||| ||| Sbjct 319 AGCATCATGAACTCCTTCGTCAACGACATCTTCGAGAGGATCGGCGGAGAGGCCTCCCGC 260 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | | | ||||||||||||||||||||| Sbjct 259 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCCGTGCGC 200 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| ||| || ||||||| ||||||||| ||||||||||||| Sbjct 199 CTCCTGCTGCCCGGAGATCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 151 >seq22890 Length=4053 Score = 172 bits (190), Expect = 8e-37 Identities = 175/227 (77%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| |||||| |||| |||| ||| |||| ||||| Sbjct 3790 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 3737 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| |||||||||||||| | || ||||||||| |||||| ||| Sbjct 3736 AGCATCATGAACTCTTTTGTCAACGACATCTTTGAGCGCATCGGCGGAGAGGCCTCCCGC 3677 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | | | ||||||||||||||||||||| Sbjct 3676 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCCGTGCGC 3617 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 || | ||| ||| || ||||||| |||||| || || ||||| || Sbjct 3616 CTCCTGCTGCCCGGAGAGCTGGCCAAGCACGCTGTGTCTGAGGGTAC 3570 >seq17965 Length=24390 Score = 172 bits (190), Expect = 8e-37 Identities = 175/227 (77%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| |||||| |||| |||| ||| || ||||| Sbjct 21432 TACAAGGTGCTGAAGCAGGTTCACCCCGACACCGG-----CATC-TCCTCTAAAGCCATG 21485 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| |||||||||||||| | || ||||||||| |||||| ||| Sbjct 21486 AGCATCATGAACTCTTTTGTCAACGACATCTTTGAGCGCATCGGCGGAGAGGCCTCCCGC 21545 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | | | ||||||||||||||||||||| Sbjct 21546 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCCGTGCGC 21605 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 || | ||| ||| || ||||||| ||||||||| || |||||||| Sbjct 21606 CTCCTGCTGCCCGGAGAGCTGGCCAAGCACGCCGTGTCTGAGGGCAC 21652 >seq10525 Length=65857 Score = 149 bits (164), Expect = 9e-30 Identities = 170/227 (75%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 |||||||||||||||||||| |||||| |||| | ||| ||| |||| ||||| Sbjct 4648 TACAAGGTGCTCAAGCAGGTCCACCCCGACACCGGT-----ATC-TCCTCCAAGGCCATG 4595 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| | |||||| ||||| ||| Sbjct 4594 AGCATCATGAACTCCTTCGTCAACGACATCTTCGAGAGGATCGGCGGAGAGGCTTCCCGC 4535 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| | |||||||||| ||| ||| | | | |||||||||||||| |||||| Sbjct 4534 CTGGCGCATTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCTGTGCGC 4475 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 || | ||| ||| || |||||| |||||||| || || ||||| Sbjct 4474 CTCCTGCTGCCCGGAGAGTTGGCCAAACACGCCGTGTCTGAAGGCAC 4428 >seq28053 Length=77842 Score = 136 bits (150), Expect = 6e-26 Identities = 168/227 (74%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||| ||||| || ||||| || ||| || ||| |||| ||| |||| | ||| Sbjct 70943 TACAAAGTGCTAAAACAGGTCCATCCCGACAC---TGG--CATC-TCCTCCAAGGCAATG 70890 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| | |||||| ||||| |||| Sbjct 70889 AGCATCATGAACTCCTTCGTCAACGACATCTTCGAGAGGATCGGCGGTGAGGCTTCTCGC 70830 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || ||||||||| ||| ||| | | | ||||| |||||||||||||| Sbjct 70829 CTGGCGCACTATAACAAGCGCTCCACCATCACCTCCAGGGAGATTCAGACCGCCGTGCGT 70770 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 || | ||| ||| || ||||||| |||||| || ||||| ||||| Sbjct 70769 CTTTTGTTGCCCGGAGAGCTGGCCAAGCACGCAGTGTCCGAAGGCAC 70723 >seq7998 Length=12346 Score = 132 bits (146), Expect = 7e-25 Identities = 167/229 (73%), Gaps = 13/229 (6%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||| ||| |||||| |||| |||| ||| |||| |||| Sbjct 4674 TACAAGGTGCTGAAGCTGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGACCATA 4727 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||| || ||| | |||||| |||||| Sbjct 4728 AGCATCATGAACTCCTTCATCAACGATATCTTCGTGAGGATCGGCGGAGAGGCC------ 4781 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 |||||| || |||||||||| ||| ||| | | | ||||||||||||||||||||| Sbjct 4782 -TGGCGCACTACAACAAGCGCTCCACCATCACCTCCGGGGAGATCCAGACCGCCGTGCGC 4840 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | || ||| || ||||||| |||||||| ||||||||||||| Sbjct 4841 CTCCTGCTGTCCGGAGAGCTGGCCAAACACGCCGTGTCCGAGGGCACCA 4889 >seq23246 Length=13328 Score = 107 bits (118), Expect = 3e-17 Identities = 128/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 724969 CCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCG 725028 ||||| ||||||||||| || || || ||| | |||| | |||| ||| || || Sbjct 5452 CCATGAGCATCATGAACTCCTTCGTGAATGACCTTTTCGAGAGGATCGCCACGGAAGCGT 5511 Query 725029 GTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCG 725088 || | |||| | ||||||||||| ||| ||| || || ||| | ||||| || | Sbjct 5512 CCCGTTTAGCGCAGTACAACAAGCGCAGCACCATCACCAGCCGAGAGGTGCAGACTGCGG 5571 Query 725089 TGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | || ||| || ||| ||| |||||||||| |||||||| ||||||||||||| Sbjct 5572 TCCGGCTGCTCCTGCCCGGGGAACTGGCCAAACACGCCGTGTCCGAGGGCACCA 5625 >seq44951 Length=25968 Score = 102 bits (112), Expect = 1e-15 Identities = 122/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 724977 ATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTG 725036 ||||||||||| ||||||||| | || | || |||||||| ||| || | |||| Sbjct 4841 ATCATGAACTCTTTTGTCAACAAAATCTTTGAGCGCATCGGTGGAGAGACCTCCCTCCTG 4782 Query 725037 GCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTG 725096 | | || ||||||| || ||| ||| | | | |||||||||||||| |||||||| Sbjct 4781 GAACACTACAACAAGTGCTCCACCATCACCTCCAGGGAGATCCAGACCGCTGTGCGCCTC 4722 Query 725097 ATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | ||| || || ||||||| ||| |||| || |||||||||| Sbjct 4721 CTGCTGCCTGGAGAGCTGGCCAAGCATTCCGTGTCTGAGGGCACCA 4676 >seq5499 Length=1901 Score = 89.7 bits (98), Expect = 7e-12 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 ||||| ||| ||||||| || | | ||||| || | || ||||||||||||||||| Sbjct 1532 CGCTTCATGCAAGAGGTGCAGGTAACGGAGGCGCGCTGCTTCTACGGGTTCCAGATCGCG 1591 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGAC 1456068 || || ||||||||||| || | ||| || || ||||||||||| |||||||| Sbjct 1592 ATGGAGAACATCCACTCGGAGATGTACAGCCTGCTCATCGACACCTATATCAAGGAC 1648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7173310564335244