Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq27510 122 9e-23
seq44130 91.5 1e-13
>seq27510
Length=34911
Score = 122 bits (134), Expect = 9e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543
||||||||||| | |||| ||| | ||| || ||||||||||| ||||||||||||||
Sbjct 29905 TTTCCTCCTCTCAAACGCAGCACCAAGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCA 29964
Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603
| |||| || || || ||||| || || || ||||||| | |||||| || ||
Sbjct 29965 GAGAGGGTGCGACCATCTTCAAGCTGCTTACCAGCGAAAATCAGCCTCTGCTGGTCAGGA 30024
Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663
|| || || ||||| || || || ||| ||||| || | ||||| | ||||
Sbjct 30025 GGGATACCCTCTTTGTCCTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTAGGTTCC 30084
Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || | ||| ||||| || || || | || || || |||||||||||
Sbjct 30085 ACTTCCAAAGTGATGGTCTTCCCAGTCAGGGTCTTCACAAAAATTTGCAT 30134
Score = 105 bits (116), Expect = 7e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|||||||| || || | ||| | ||| || ||||| ||||| || |||||||||||
Sbjct 30136 CCTCCTCTCAGACGTAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 30195
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | || || || || || || |||||||||| | |||||| || || ||
Sbjct 30196 AGAGTGCGGCCATCTTCTAGTTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCAGGAGGG 30255
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || ||||| || || || || || | |||||| || || ||
Sbjct 30256 ATACCTTCCTTATCTTGGATCTTGGCCTTCACGTTTTCAATTGTGTCACTCGGCTCAACT 30315
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
|| | ||| ||||||||||| || | || ||||| || || |||||||||
Sbjct 30316 TCCAAAGTGATGGTTTTACCAGTCAGGGTCTTAACAAAGATCTGCATTTTG 30366
>seq44130
Length=14217
Score = 91.5 bits (100), Expect = 1e-13
Identities = 161/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| |||| || ||||| || ||| |||| || || ||||||||||||
Sbjct 11833 CCACCCCAGAGACGCAGGACAAGGTGAAGGGTGAATTCTTTCTGGATGTTGTAGTCGGAG 11892
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || || ||||| ||||| |||| |||| | ||||||||| || ||
Sbjct 11893 AGGGTGCGGCCATCTTCAAGCTGCTTGCCAACAAAGATCAGCCTCTGCTGATCTGGGGGA 11952
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATG-TGTCGGACGATTCCAC 134665
|||||||| || || |||| | || | | | | | || || ||||| | || ||
Sbjct 11953 ATGCCTTCCTTGTCCTGAA-TCTTGGCTATAACATTTTCAGTGATGTCGCTGGGTTTGAC 12011
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
| ||||| ||||| || || || | ||||| || ||||| || || |||
Sbjct 12012 CTGCAGAGTGATGGTCTTCCCAGTGAGGGTTTTCACAAAAATCTGTATGTTG 12063
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505103613748240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |