Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq11038 668 0.0
seq15624 140 4e-28
seq19576 129 8e-25
>seq11038
Length=78219
Score = 668 bits (740), Expect = 0.0
Identities = 1351/1988 (68%), Gaps = 35/1988 (2%)
Strand=Plus/Plus
Query 68623 TGAATGGATCCACCATCGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTC 68682
|| ||||||||| | | || || ||||||| ||||| || ||||||| |
Sbjct 22134 TGTATGGATCCATTTTGAGCAATGATCTTATTCTTCATCTCCTCGTTCCACAGCCCCCGT 22193
Query 68683 TCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTA 68742
|| || | | | || ||||| || || || || ||||| || ||||| | ||||||
Sbjct 22194 TCAGTGAGGTCCTTCAGCAGATGTGGGTTTACAATCTGAAACTCTCCAGAGAGGACTCTA 22253
Query 68743 CGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCA 68802
|| ||||| || || ||||| || | ||| | || ||||| || || || ||||| ||
Sbjct 22254 CGTGTGTAGATGTTGCTGGTGTAGGCTTCGATGGACTCATTGTTGCCGAGTATTTGTGCT 22313
Query 68803 GTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATT 68862
|| || || || ||||| || |||| ||| | ||| ||||| | ||| ||| | ||
Sbjct 22314 GTGGAGGCTGTGGGCATGGGGGCCAACAACAGACTGTTTCTCACACCGTGTTTAGCAATC 22373
Query 68863 TTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTAT 68922
|| || || || | ||||| ||||| || |||| || || | ||| | || ||
Sbjct 22374 TTCTCCTTAAGCAGCTTCCAGTCCCAGAGCTCAGTGGGCACCTTTTCCCACATGTCATAC 22433
Query 68923 TGTAGAATTCCGTTACTTGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCA 68982
|| ||||| || |||| | || || ||||| |||||||| || || | |||
Sbjct 22434 TGCAGAATGCCTCTACTCACTGGAGAGCCTGGGTATGTCTCATAAGGCCCATCTTTTTCT 22493
Query 68983 GCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTG 69042
|| | || || |||||||| | ||| | || || || || || || |||| ||||
Sbjct 22494 GCCAACTCCCAGCTTGCCTCCAGGGCAGCATAGTAGATGGTCTCAAAGATCTGGATATTC 22553
Query 69043 AGATCTTGTGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAAT 69102
|| || ||||| | || || ||||||||| | | || || || |||||||| |
Sbjct 22554 AGCAGCTGGGCTTCAGGGCTTTCAAATGGATAACGCATGAGGATGAAGGCATCTGCAAGA 22613
Query 69103 CCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATA 69162
||||| || ||||| ||||| || || || | ||| |||||| | || ||||| ||||
Sbjct 22614 CCCTGCACACCAATCCCGATTGGCCTGTGGCGCTTGTTTGAATTCTCTGCTTCAGGAACT 22673
Query 69163 GGATAATAATTAATATCTATAATTTTATTAAGATTTCGGACTACTACTTTA---ACCACG 69219
|| || || ||||| || || || || || || |||| || | ||||||| ||| |
Sbjct 22674 GGGTAGTAGTTAATGTCAATGATCTTGTTGAGGTTTCTTACAATTACTTTAGTGACCGAG 22733
Query 69220 TC---CTTTAGTTTGAGAAAATCAAAT---CGTCCATCTATAACAAACATATTCAGTGCT 69273
| |||| |||| | ||||| ||| | ||||| |||| || || ||
Sbjct 22734 GCAAGCTTT---TTGA---AGTCAAAGGTGCGTTCCGGAGTAACATACATGTTGAGAGCA 22787
Query 69274 ACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTA 69333
| || || | ||||| || || || |||| ||| ||| | | ||||| ||
Sbjct 22788 ATGGAGGCCAAGTTACAGACGGCCACTTCATCTTTGCTTGTATACTCCACAATCTCAGTG 22847
Query 69334 CATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCG 69393
|| | ||||| |||||||| || |||| ||| ||||| |||||||| ||||||||||
Sbjct 22848 CACAAGTTACTGCATTTGATGGTGCCCAAATTCTGCTGGTTACTCTTCCTGTTACAGGCA 22907
Query 69394 TCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAA 69453
|| ||||| | || | || || || ||||| ||||||| ||||| || | | |||
Sbjct 22908 TCTTTGTACAACATGTAAGGTGTTCCTGTTTCTGTCTGAGACTCGATGATGGCATACCAC 22967
Query 69454 ACGACCCTAGCATTTATTACGGTCTTGTAACGCTTCTCT--TTTTCATATTGTGTATATA 69511
| | ||| || | || ||| || || | || | ||||||||| || || |
Sbjct 22968 AACTGCTGAGCCTTGACCACCCGCTTC--ACTCTACCCTCCTGTTCATATTGAGTGTAGA 23025
Query 69512 GCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCA 69571
|| || || || || |||||| |||||||| ||||| || ||| | || |||||||
Sbjct 23026 GCTTCTCAAACTCCTCCCCCCAACACTCATCCAACCCAGGGCACTCACTGGGGCACATCA 23085
Query 69572 ATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTA 69631
||||| | | | | | || | ||||| || ||||| || ||||| || || |
Sbjct 23086 GAGACCAGTCCTGGTTGTTTTCCACCCTCTTCATGAACAGATCAGGGATCCATAGGGC-A 23144
Query 69632 TA-AAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAAC 69690
|| ||||| |||| | || | || || || || || || || || || || || ||
Sbjct 23145 TAGAAGAGGTCTCGTGCCCTCTGCTCCTCTTTACCAGTGTTCTTCTTCAGCTCAAGGAAG 23204
Query 69691 TCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTT 69750
|| | | |||| | |||||||| || || ||||| || | | ||||||||||||||
Sbjct 23205 TCAAACACATCAAAGTGCCATGGCTCCAGGTATATGGCAAAAGCACCCGGTCGTTTATTG 23264
Query 69751 CCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCA 69810
|| || || || | ||| | || ||||| || || |||||||||||||| | || |||
Sbjct 23265 CCACCTTGGTCCACGTAGCGTGCGGTGTTGTTGTACACTCTCAGCATCGGCACAAGGCCA 23324
Query 69811 TTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT 69870
|| || |||||||||||||||| ||| ||||| ||| ||| | |||| |||| | |
Sbjct 23325 TTTGAGTTACCATTTGTTCCAGCAATGTAACTACCTGTTGATCTAATACAGCTAACTGCT 23384
Query 69871 AGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATA 69930
| ||| || |||||||| ||||||||| |||||||| |||| | ||| ||||| ||
Sbjct 23385 ACACCAATCCCTCCTGCAGATTTAGAGATGAGAGCACATTGTTTGAGTGTATCATAAATG 23444
Query 69931 CCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTA-T 69989
|| || ||||| ||||| ||||| || || || ||||| || | || | | || |
Sbjct 23445 CCATCAATGCTGTCATCCTTCATGGCCAGCAGGAAGCAGCTGGAGAGCTG-GGGTCTATT 23503
Query 69990 AGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATT 70049
|| || || || || | || ||||| || ||||||||||| || ||||| ||||| ||
Sbjct 23504 GGTGCCTGCGTTGAACAGAGTGGGAGAGGCATGAGTGAACCACTTCTCAGACAGCAGGTT 23563
Query 70050 GTATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAA 70109
||| || ||||| |||| |||||||| | || ||||| | || || | ||| |
Sbjct 23564 GTAGGTCTCAATGGCTGCATCTATATCAGTGTTGTGGATTCCAACAGCTACTCTCATGAG 23623
Query 70110 CATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAG 70169
||| ||||| || || || || |||| ||| ||||||| |||||| || || |
Sbjct 23624 CATGTGCTGTGGGCGCTCAGCCACTTTACCATTGATTTTCAGCAGGTAGGAGCGCTCTAA 23683
Query 70170 AGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAG 70229
|| ||||| ||||| | ||||| ||||| || || || ||||| ||| |||| || ||
Sbjct 23684 TGTCTTAAAGCCAAAGAAATTGTAAGAAAAATCCCTATCATAAATTATAGCAGAGTTGAG 23743
Query 70230 TTTATCCTTATATTTGGTA--ACTATATCCA-TAACAGTAGGTGAGATAATCGGAGA--- 70283
|| | | |||| | || ||||| | | | || ||||| || || ||
Sbjct 23744 GCGGTC--TTTGTTTGCAAGGACAATATCTAGGGTCTCTTGG-GAGATCATGGGGGAGTG 23800
Query 70284 TCGTTTACCATTTTTAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTAAATAG 70343
|| || |||| |||||| ||||||| ||| | ||| ||||| |||||||| || |
Sbjct 23801 GCGCTT---ATTTAAAGGATTGACATAGTGGAACAGATCCTCCATGACATCACTGAACAC 23857
Query 70344 tttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTC 70403
|| || || || || || | || || | || || | || || || || ||||| ||
Sbjct 23858 CTTCTTGGTCTCTTTATGGAGGTTGGACACAGCAATCCGTGCAGCCAGGATGGCATAATC 23917
Query 70404 AGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGT 70463
|| || | || || || || || || || ||||| | || || || || | |||
Sbjct 23918 TGGGTGCTTCGTGGTCAGTGTGGCAGCAATCTCTGCAGCAAGTGTGTCCAACTCCACAGT 23977
Query 70464 TGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGGCTATTTTGATAGGATCTATGAA 70523
|| |||||| | || || ||||| || || ||||| | |||| | || || | ||
Sbjct 23978 GGTCACTCCGCTGTACAGACCTTGGATCACCTTCATCGTGATTTGTGTGGGGTCCACAAA 24037
Query 70524 TTCTGTGTTCAGACCATAACATAATTTTCTAATACGAGATGTAATTTTATCAAACATAAC 70583
|||| || || |||||||| | || || ||||| || |||||||||||||| ||
Sbjct 24038 CTCTGCATTGAGCCCATAACAGAGCTTCTGGATTCGAGAGGTGATTTTATCAAACATGAC 24097
Query 70584 ATTCTCCT 70591
|||||
Sbjct 24098 GCGCTCCT 24105
Score = 98.7 bits (108), Expect = 1e-15
Identities = 123/169 (73%), Gaps = 0/169 (0%)
Strand=Plus/Plus
Query 68441 TCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATAT 68500
|||| || || || ||||| || || | |||| ||| |||| || || ||||||||||
Sbjct 21872 TCCAACCATAAAAGTGCATGCTGGTCAATTTGCCATAGTTTGGCTCTGCAATATGAATAT 21931
Query 68501 TCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCT 68560
| | || || ||||| || ||| |||| || | || || ||||| || | | | |||
Sbjct 21932 TTAGGGACTGGCTTTGGTCAATGTAAGCACCGCGGTCGGCAGCCATCTTGAGTACAGTCT 21991
Query 68561 TTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGG 68609
| || | |||||||||| ||| ||| | | |||||| | |||||||||
Sbjct 21992 TCTGTGATATTTCCCAAACAGTTTTATACAACTGTTTTAAATCATCTGG 22040
>seq15624
Length=12484
Score = 140 bits (154), Expect = 4e-28
Identities = 142/185 (77%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 68947 GATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAAT 69006
|| ||| |||||||||||||||||| || || ||||||||||||| || ||||| ||
Sbjct 11336 GAGCCAGCATATGTTTCATAAGGTCCATCTTGGGCAGCTAGTTCACAGCTGGCCTCCAAA 11395
Query 69007 GCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCG 69066
||| | |||||||| || || ||||||| | ||||||| || || | | ||| |||
Sbjct 11396 GCAGCATAATAAATGGTCTCAAAAATCTGGATGTTGAGATGCTGGGCCTTTTCACTTTCG 11455
Query 69067 AATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGT 69126
||||||||| | | ||||| || || || || | |||||||| ||||| || ||||||
Sbjct 11456 AATGGATAACGCATGAGAATGAAGGCGTCCGCAAGACCCTGAACACCAATCCCAATAGGT 11515
Query 69127 CTATG 69131
|| ||
Sbjct 11516 CTGTG 11520
>seq19576
Length=429644
Score = 129 bits (142), Expect = 8e-25
Identities = 110/136 (81%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698
|||||||||| || || | ||| || ||| | || || |||||||||||||| | |||||
Sbjct 417021 CCTCATCTCTGCTGATAAGTTCATTGGAATAAGTAAGCCCAGGCATTAGACCCCTCTTTT 416962
Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758
| |||||| | ||||| ||||| |||||||| ||||| || || ||||| ||||||||||
Sbjct 416961 TCAGCCAATAAATGGCGGCAAAGGATCCAGAGAAGAAAATTCCCTCTACAGCTGCAAATG 416902
Query 39759 CAACAAGTCTCTCTCC 39774
| |||| ||| || ||
Sbjct 416901 CCACAATTCTTTCACC 416886
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686508143269680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |