Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq11038 226 4e-54
seq15624 96.9 4e-15
seq19576 82.4 1e-10
>seq11038
Length=78219
Score = 226 bits (250), Expect = 4e-54
Identities = 946/1462 (65%), Gaps = 46/1462 (3%)
Strand=Plus/Plus
Query 110646 TGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCA 110705
||||||| || | || || ||| ||||| |||||| || | |||| ||| |
Sbjct 22198 TGAGGTCCTTCAGCAGATGTGGGTTTACAATCTGAAACTCTCCAGAGAGGACTCTACGTG 22257
Query 110706 GGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGG 110765
||||||||| | ||||| | ||| | | | ||||| || || | |||||||| ||||
Sbjct 22258 TGTAGATGTTGCTGGTGTAGGCTTCGATGGACTCATTGTTGCCGAGTATTTGTGCTGTGG 22317
Query 110766 AGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTT 110825
||||||| ||||| || |||| ||| |||||||| | | ||| | | || |
Sbjct 22318 AGGCTGTGGGCATGGGGGCCAACAACAGACTGTTTCTCACACCGTGTTTAGCAATCTTCT 22377
Query 110826 CCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTT-CACCTT--CCCACATGTCAAACT 110882
|||| || | | |||||| || |||| || |||||| ||||||||||| |||
Sbjct 22378 CCTTAAGCAGCTTCCAGTCCCAG---AGCTCAGTGGGCACCTTTTCCCACATGTCATACT 22434
Query 110883 GAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAG 110942
| || | ||| | | ||||| || | || ||||| | || | ||| |
Sbjct 22435 GCAGAATGCCTCTACTCACTGGAGAGCCTGGGTATGTCTCATAAGGCCCATCTTTTTCTG 22494
Query 110943 CCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA 111002
|||| || ||||| |||||||||| || | || ||||| |||||||| | |||||
Sbjct 22495 CCAACTCCCAGCTTGCCTCCAGGGCAGCATAGTAGATGGTCTCAAAGATCTGGATATTCA 22554
Query 111003 TCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGAC 111062
| || ||||||| ||||||| || || | || || |||| || ||||
Sbjct 22555 GCAGCTGGGCTTCAGGGCTTTCAAATGGATAACGCATGAGGATGAAGGCATCTGCAAGAC 22614
Query 111063 CTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---A 111119
| || ||||| | || || || ||||| ||| | || || || | | | ||| |
Sbjct 22615 CCTGCACACCAATCCCGATTGGCCTGTGGCGCTTGTTTGAATT---CTCTGCTTCAGGAA 22671
Query 111120 CGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAAT--CTTT-GTGA 111176
| || || | || ||||||||| ||| || ||| | ||||| |||| ||||
Sbjct 22672 CTGGGTAGTAGTTAATGTCAATGATCTTGTTGAGGTTTCTT---ACAATTACTTTAGTGA 22728
Query 111177 TTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGG 111236
||| |||| | ||||| ||||| || | | |||||| | || |
Sbjct 22729 CCGAGGCAAGCTTTTTGAAGTCAAAGGTGCGT---TCCGGAGTAACATACATGTTGAGAG 22785
Query 111237 CGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTG 111296
| || || ||||| || || || ||| ||||| || ||| ||||| | ||| || |
Sbjct 22786 CAATGGAGGCCAAGTTACAGACGGCCACTTCATCTTTGCTTGTATACTCCACAATCTCAG 22845
Query 111297 TACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACG 111356
| || ||||| | || || || |||||||||| |||||||||||| |||| || |
Sbjct 22846 TGCACAAGTTACTGCATTTGATGGTGCCCAAATTCTGCTGGTTACTCTTCCTGTTACAGG 22905
Query 111357 CATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCC 111416
|||| ||||| | |||||| || || || || || ||||| || | || || || | ||
Sbjct 22906 CATCTTTGTACAACATGTAAGGTGTTCCTGTTTCTGTCTGAGACTCGATGATGGCATACC 22965
Query 111417 A-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAG 111475
| ||| | | | || | || || || | | |||||| || || | ||||||
Sbjct 22966 ACAACTGCTGAGCCTTGACCACCCGC-TTCACTCTACCCTCCTGTTCATATTGAGTGTAG 23024
Query 111476 AGGGCTTCAAACTCCT-CACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCT-GGACAGA 111533
|| |||||||||| | |||| | | || | ||| | || | || || || |
Sbjct 23025 AGCTTCTCAAACTCCTCCCCCCAACAC-TCATCCA-ACCCAGGGCACTCACTGGGGCACA 23082
Query 111534 AAAGAGACCATTGACCACCT--TCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAG 111591
|||||||| | || | | || |||| ||||||||| || || || ||||| ||
Sbjct 23083 TCAGAGACCA--GTCCTGGTTGTTTTCCACCCTCTTCATGAACAGATCAGGGATCCATAG 23140
Query 111592 GGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGT-AACTCAA 111650
|| | ||||| |||| || ||| || | ||| ||| || | | |||||
Sbjct 23141 GGCATAGAAGAGGTCTCGTGCCCTCTGCTCCTCTTTACCAGTGTT-CTTCTTCAGCTCAA 23199
Query 111651 GGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG-- 111708
|||| || | | ||| |||||||||||| || || | || | || ||| |||
Sbjct 23200 GGAAGTCAAACACATCAAAGTGCCATGGCTCCAGGTATATGGCAAAAGCACCCGGTCGTT 23259
Query 111709 -ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAA 111767
| ||| |||| | || ||||| || ||| ||| | || | ||||| || | ||
Sbjct 23260 TATTGCCACCTTGGTCCACGTAGCGTGCGGTGTTGTTGTACACTCTCAGCATCGGCACAA 23319
Query 111768 TACCATCTGATTGACCATTTGTCCCCCGAATACGA-GATTTATTGGCTCTCACATCATGG 111826
|||| ||| | ||||||||| || ||| | | | || | ||| | | ||
Sbjct 23320 GGCCATTTGAGTTACCATTTGTTCCAGCAATGTAACTACCTGTT-GATCTAATA-CAGCT 23377
Query 111827 ATGTGC-ATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCC 111885
| ||| | ||||| || || || | || ||||| | ||||| | | || || |
Sbjct 23378 AACTGCTACACCAATCCCTCCTGCAGATTTAGAGATGAGAGCACATTGTTTGAGTGTATC 23437
Query 111886 ATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGG 111945
||| || || | || ||| ||||| |||| | |||||||| ||||| | ||| ||
Sbjct 23438 ATAAATGCCATCAATGCTGTCATCCTTCATGGCCAGCAGGAAGCAGCTGGAGAGCTGGGG 23497
Query 111946 TC--TTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGA 112002
|| |||||| || || ||||| || || || | || ||| ||||| || | | ||
Sbjct 23498 TCTATTGGTG--CCTGCGTTGAACAGAGTGGGAGAGGCATGAGTGAAC-CACTTCTCAGA 23554
Query 112003 CATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGAC 112062
|| | || ||| ||||| | | | | ||| || || |||||| || | || ||
Sbjct 23555 CAGCAGGTTGTAGGTCTCAATGGCTGCATCTATATCAGTGTTGTGGATTCCAACAGCTAC 23614
Query 112063 CCGCATGAACATGTACTGTGGG 112084
| ||||| ||||| |||||||
Sbjct 23615 TCTCATGAGCATGTGCTGTGGG 23636
>seq15624
Length=12484
Score = 96.9 bits (106), Expect = 4e-15
Identities = 113/153 (74%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 111265 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCC 111324
|||||| || |||||| |||| ||| || || || | |||| || || || ||
Sbjct 11839 CTCATCTTTGCTTGTGTATTCTACAATCTCAGTGCACAGGTTGCTGGATTTGATGGTGCC 11898
Query 111325 CAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 111384
| ||||| ||||| |||||| | ||||| ||||| |||||||||||||| || || ||
Sbjct 11899 TAGATTCTGCTGGTTGCTCTTCCTATTGCATGCATCTTTGTAGAGCATGTATGGGGTACC 11958
Query 111385 CGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA 111417
|||||| |||||||| | | ||| || | |||
Sbjct 11959 CGTCTCTGTCTGTGACTCAATAATGGCATACCA 11991
>seq19576
Length=429644
Score = 82.4 bits (90), Expect = 1e-10
Identities = 93/122 (76%), Gaps = 2/122 (2%)
Strand=Plus/Minus
Query 122678 CCTCATCTCGGGAAATAAGTTCATTTG-AGAAGCATAGACCTGGCATGAGACCCCGCTTC 122736
||||||||| | ||||||||||| | | ||| | || || ||||| ||||||| |||
Sbjct 417021 CCTCATCTCTGCTGATAAGTTCATTGGAATAAGTA-AGCCCAGGCATTAGACCCCTCTTT 416963
Query 122737 TTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 122796
|||| ||||||||| ||| || || || |||||||| || ||||| ||| |||||
Sbjct 416962 TTCAGCCAATAAATGGCGGCAAAGGATCCAGAGAAGAAAATTCCCTCTACAGCTGCAAAT 416903
Query 122797 GC 122798
||
Sbjct 416902 GC 416901
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627665684635200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |