Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq11038 122 1e-22
seq15624 86.0 8e-12
>seq11038
Length=78219
Score = 122 bits (134), Expect = 1e-22
Identities = 579/910 (64%), Gaps = 19/910 (2%)
Strand=Plus/Plus
Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241
||||| ||| | ||||| | || | | |||||||||| || | ||||| |||||||||
Sbjct 22260 TAGATGTTGCTGGTGTAGGCTTCGATGGACTCATTGTTGCCGAGTATTTGTGCTGTGGAG 22319
Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301
|||||||||||||| |||| | || ||||| | | ||| | || ||| |||
Sbjct 22320 GCTGTGGGCATGGGGGCCAACAACAGACTGTTTCTCACACCGTGTTTAGCAATCTTCTCC 22379
Query 118302 TTGAG-AGCGTCCCAGTCGTAGTTGAGCT---TTGTCTCCCCCTGCCACATATCAAACTG 118357
|| || ||| | |||||| | ||||| | | | || | |||||| ||| ||||
Sbjct 22380 TTAAGCAGC-TTCCAGTCCCA---GAGCTCAGTGGGCACCTTTTCCCACATGTCATACTG 22435
Query 118358 GAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGC 118417
|| || ||| | |||| || || |||||||||| || || || || ||
Sbjct 22436 CAGAATGCCTCTACTCACTGGAGAGCCTGGGTATGTCTCATAAGGCCCATCTTTTTCTGC 22495
Query 118418 CAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCAT 118477
||| || |||| ||||| ||||| || | || || || ||||| || | |||||
Sbjct 22496 CAACTCCCAGCTTGCCTCCAGGGCAGCATAGTAGATGGTCTCAAAGATCTGGATATTCAG 22555
Query 118478 TGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCA-CAAAATAAATACATCCGCGAGAC 118536
|| ||| || | ||||| | || ||| | || || |||| || ||||
Sbjct 22556 CAGCTGGGCTTCAGGGCTTTCAAATG-GATAACGCATGAGGATGAAGGCATCTGCAAGAC 22614
Query 118537 CTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGG 118596
| || ||||| | || ||||| | || | | | || || ||| || || |
Sbjct 22615 CCTGCACACCAATCCCGATTGGCCTGTGGCGCTTGTTTGAATTCTCTGCTTCAGGAACTG 22674
Query 118597 GATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCAT 118656
| || | || | || || | | | || || ||| | | || || ||||
Sbjct 22675 GGTAGTAGTTAATGTCAATGATCTTGTTGAGGTTTCTTACAATTACTTTAGTGACCGAGG 22734
Query 118657 GAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTG 118716
|||||||| | | ||||| |||| || | | |||||| | || || || |
Sbjct 22735 CAAGCTTTTTGAAGTCAAAGGTGCG---TTCCGGAGTAACATACATGTTGAGAGCAATGG 22791
Query 118717 ACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACA 118776
| |||| ||||| || | ||||| || || ||||| | ||| || |||||||
Sbjct 22792 AGGCCAAGTTACAGACGGCCACTTCATCTTTGCTTGTATACTCCACAATCTCAGTGCACA 22851
Query 118777 AGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCT 118836
|||| | || ||||||||||| |||| || || ||| ||||||| ||||| |
Sbjct 22852 AGTTACTGCATTTGATGGTGCCCAAATTCTGCTGGTTACTCTTCCTGTTACAGGCATCTT 22911
Query 118837 TGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACAT 118896
|||| | |||||| || || || || || || || |||| || || || | || |||
Sbjct 22912 TGTACAACATGTAAGGTGTTCCTGTTTCTGTCTGAGACTCGATGATGGCATACC--ACAA 22969
Query 118897 CGGCAG---CTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGG 118953
| || | || | || || || ||| ||||| | || || | ||||||||
Sbjct 22970 CTGCTGAGCCTTGACCACCCGC-TTCACTCTACCCTCCTGTTCATATTGAGTGTAGAGCT 23028
Query 118954 CTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAG 119013
|||||||| || ||| ||| | ||| || || | ||||| | ||||
Sbjct 23029 TCTCAAACTCCTCCCCCCAACACTCATCCAACCCAGGGCACTCACTGGGGCACATCAGAG 23088
Query 119014 ACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGA 119073
|||| | | || |||| ||||||||| || || |||||||| || || |||
Sbjct 23089 ACCAGTCCTGGTTGTTTTCCACCCTCTTCATGAACAGATCAGGGATCCATAGGGCATAGA 23148
Query 119074 AGAGATCCCG 119083
|||| || ||
Sbjct 23149 AGAGGTCTCG 23158
>seq15624
Length=12484
Score = 86.0 bits (94), Expect = 8e-12
Identities = 74/92 (80%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241
|| || ||| | ||||| | ||||| | |||| ||||| || | ||| ||||| ||||||
Sbjct 10805 TAAATGTTGCTGGTGTAAGCCTCAATGGACTCGTTGTTGCCGAGGATCTGGGCAGTGGAG 10864
Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 118273
||||||||||| || |||| ||| ||||||||
Sbjct 10865 GCTGTGGGCATTGGGGCCAGGAGCAGGCTGTT 10896
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618074482208720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |