Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq11038 242 4e-59
seq19576 82.4 9e-11
>seq11038
Length=78219
Score = 242 bits (268), Expect = 4e-59
Identities = 971/1498 (65%), Gaps = 48/1498 (3%)
Strand=Plus/Minus
Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280
||||||| ||||| ||||| | || || | || || || || || ||| | |
Sbjct 23636 CCCACAGCACATGCTCATGAGAGTAGCTGTTGGAATCCACAACACTGATATAGATGCAGC 23577
Query 104281 CTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCT 104339
| | ||||| ||| || | |||| | | || ||||| ||| || | || || || |
Sbjct 23576 CATTGAGACCTACAACCTGCTGTCTGAGAAGTG-GTTCACTCATGCCTCTCCCACTCTGT 23518
Query 104340 TCAATGCTGGTACACCAA--GACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGA 104397
|||| || || |||||| ||||||| | ||||| |||||||| | |||| |||||
Sbjct 23517 TCAACGCAGG--CACCAATAGACCCCAGCTCTCCAGCTGCTTCCTGCTGGCCATGAAGGA 23460
Query 104398 GGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGC 104457
||| || | || || |||| || || | | ||||| | ||||| || | ||
Sbjct 23459 TGACAGCATTGATGGCATTTATGATACACTCAAACAATGTGCTCTCATCTCTAAATCTGC 23400
Query 104458 TGGGGGTATTGGGAT-GCACATCCATGATGTGAGAGCCAATAAATC-TCGTATTCGGGGG 104515
|| || ||||| | ||| | || | | ||| | || | | | ||| ||
Sbjct 23399 AGGAGGGATTGGTGTAGCAGTTAGCTG-TATTAGATC-AACAGGTAGTTACATTGCTGGA 23342
Query 104516 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 104575
||||||||| | ||| |||| || | || ||||| | || | ||| ||| || |||
Sbjct 23341 ACAAATGGTAACTCAAATGGCCTTGTGCCGATGCTGAGAGTGTACAACAACACCGCACGC 23282
Query 104576 TATGTAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 104632
|| || | |||| ||| | ||| ||| || | || | || || |||||||||
Sbjct 23281 TACGTGGACCAAGGTGGCAATAAACGACCGGGTGCTTTTGCCATATACCTGGAGCCATGG 23222
Query 104633 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGG 104692
||| ||| | | || ||||||||| || ||| ||| | |||||| | ||
Sbjct 23221 CACTTTGATGTGTTTGACTTCCTTGAGCTGAAGAAGAACACTGGTAAAGAGGAGCAGAGG 23162
Query 104693 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 104752
|| || ||||||| || || ||||| || ||||| ||||||||||| || || |
Sbjct 23161 GCACGAGACCTCTTCTATGCCCTATGGATCCCTGATCTGTTCATGAAGAGGGTGGAAAAC 23102
Query 104753 AGTGGCAATTGGTCTCTCTTTTGTCC-AGACAAGGCACCTGGTCTCTCCGA-TGCCGTGG 104810
| | |||||||| | || || || | || ||||| | || || | ||
Sbjct 23101 AACCAGGACTGGTCTCTGATGTGCCCCAGTGAGTGC-CCTGGGTTGGATGAGTGTTGGGG 23043
Query 104811 GTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGG 104870
| ||||||||||| || ||||| | || || | || ||| | | || ||| ||
Sbjct 23042 G-GAGGAGTTTGAGAAGCTCTACACTCAATATGAACAGGAGGGTAGAGTGAA-GCG--GG 22987
Query 104871 TGC-CA--GCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACAC 104927
|| || ||| | ||||| | || || || ||||||| || || || || ||||
Sbjct 22986 TGGTCAAGGCTCAGCAGTTGTGGTATGCCATCATCGAGTCTCAGACAGAAACAGGAACAC 22927
Query 104928 CATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGA 104987
| |||||| | |||||||| ||||||||| |||||||| || |||||||||| |
Sbjct 22926 CTTACATGTTGTACAAAGATGCCTGTAACAGGAAGAGTAACCAGCAGAATTTGGGCACCA 22867
Query 104988 TCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTG 105047
|||| | || | || || || || |||| | |||| ||||||||| ||| |
Sbjct 22866 TCAAATGCAGTAACTTGTGCACTGAGATTGTGGAGTATACAAGCAAAGATGAAGTGGCCG 22807
Query 105048 TGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTG 105107
| |||||| | || || || |||||| || |||||| ||| || | || ||||
Sbjct 22806 TCTGTAACTTGGCCTCCATTGCTCTCAACATGTATGTTACTCCGGA---ACGCACCTTTG 22750
Query 105108 ATTATGAAAAACT--CCACGAAGTTACGAAA---ACTGTCACCAAAAACCTAAACAGAGT 105162
| | |||| || || || || || ||| | ||| | |||||| |||| |
Sbjct 22749 ACTTCAAAAAGCTTGCCTCG--GTCACTAAAGTAATTGTAAG---AAACCTCAACAAGAT 22695
Query 105163 TATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCC 105222
||||| | || | ||||| ||| || || || || | | | ||| | ||
Sbjct 22694 CATTGACATTAACTACTACCCAGTTCCTGAAGCAGAGAATTCAAACAAGCGCCACAGGCC 22635
Query 105223 AATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGA 105282
||| || | ||||| |||||||| || |||| ||||| || || | |||||||
Sbjct 22634 AATCGGGATTGGTGTGCAGGGTCTTGCAGATGCCTTCATCCTCATGCGTTATCCATTTGA 22575
Query 105283 TTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCT 105342
| ||||| || | ||| | || ||||||||||| || | || || ||
Sbjct 22574 AAGCCCTGAAGCCCAGCTGCTGAATATCCAGATCTTTGAGACCATCTACTATGCTGCCCT 22515
Query 105343 TGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCC 105402
||||| || | ||||||||||| ||||| || ||||| || | || |||||
Sbjct 22514 GGAGGCAAGCTGGGAGTTGGCAGAAAAAGATGGGCCTTATGAGACATACCCAGGCTCTCC 22455
Query 105403 AGCTTCACAAGGGG--TGCTTCAATTTGATATGTGGGAAGGTGAGACCA---AGCTTCAC 105457
|| | | || || | || || | ||| ||||||||| | | ||| |||| |
Sbjct 22454 AG--TGAGTAGAGGCATTCTGCAGTATGACATGTGGGAAAAGGTGCCCACTGAGCT---C 22400
Query 105458 TACGACTGGGAAGCT-CTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCT 105516
| |||||| ||||| || ||||| || | | ||| | | |||||||| |
Sbjct 22399 TGGGACTGG-AAGCTGCTTAAGGAGAAGATTGCTAAACACGGTGTGAGAAACAGTCTGTT 22341
Query 105517 CATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGA 105576
|||| || ||||| ||||||||||| |||||||| | || || ||||| | | | ||
Sbjct 22340 GTTGGCCCCCATGCCCACAGCCTCCACAGCACAAATACTCGGCAACAATGAGTCCATCGA 22281
Query 105577 ACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA 105636
| ||||||| | |||||||| | ||| |||| | ||||||||| |||||| ||
Sbjct 22280 AGCCTACACCAGCAACATCTACACACGTAGAGTCCTCTCTGGAGAGTTTCAGATTGTAAA 22221
Query 105637 CAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGAT 105694
| ||||| || | ||||||| || || || ||| | |||| |||||| ||
Sbjct 22220 CCCACATCTGCTGAAGGACCTCACTGAACGGGGGCTGTGGAACGAGGAGATGAAGAAT 22163
>seq19576
Length=429644
Score = 82.4 bits (90), Expect = 9e-11
Identities = 85/109 (78%), Gaps = 2/109 (2%)
Strand=Plus/Plus
Query 94816 GCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTC 94875
|||||||| ||| ||||| || ||||||||||| ||||| ||| |||||||||||
Sbjct 416901 GCATTTGCAGCTGTAGAGGGAATTTTCTTCTCTGGATCCTTTGCCGCCATTTATTGGCTG 416960
Query 94876 AAGAAGCGAGGTCTCATGCCAGGTCTCTGCTT-CTCCAACGAGCTTATC 94923
|| ||| | ||||| ||||| || || | ||| ||||| || ||||||
Sbjct 416961 AAAAAGAGGGGTCTAATGCCTGGGCT-TACTTATTCCAATGAACTTATC 417008
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 582920598556880
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