Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014- 12-02] 46,662 sequences; 679,761,122 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq10050 82.4 6e-11 >seq10050 Length=29434 Score = 82.4 bits (90), Expect = 6e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 111778 CCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACA 111837 || |||||||| || ||||||||||| || || || || ||||| || || || || Sbjct 22565 CCTGTGATGTGGGCGATCATGTATGTTAGAAGTGAATAGCTGGCAATATTGAAAGGTACT 22506 Query 111838 CCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACA 111897 || || ||||| || || || | ||||| |||||||| || || | | | ||||| Sbjct 22505 CCCAGCCCCATGTCACCAGAGCGCTGATAAAGCTGACAGGACAGCTCACCATCGCACACA 22446 Query 111898 TAAAATTGACAAAGTACATGACAAGGAGGCAATGCCAT 111935 || || |||||||| | || || || |||| ||||| Sbjct 22445 TAGAACTGACAAAGAGCGTGGCATGGGGGCAGAGCCAT 22408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391722703231906