Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq11038 178 1e-39
seq21590 87.8 2e-12
>seq11038
Length=78219
Score = 178 bits (196), Expect = 1e-39
Identities = 517/789 (66%), Gaps = 14/789 (2%)
Strand=Plus/Plus
Query 79057 GATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCAC 79116
|| |||| ||| || |||||| || || ||| | | ||| | || || ||||||
Sbjct 22791 GAGGCCAAGTTACAGACGGCCACTTCATCTTTGCTTGTATACTCCACAATCTCAGTGCAC 22850
Query 79117 AAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCC 79176
|| ||| | ||||||||||| | |||| |||||| |||||| ||||||||| ||
Sbjct 22851 AAGTTACTGCATTTGATGGTGCCCAAATTCTGCTGGTTACTCTTCCTGTTACAGGCATCT 22910
Query 79177 TTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATG 79236
||||| ||||||| || || || || || |||| || || | | | | ||| |
Sbjct 22911 TTGTACAACATGTAAGGTGTTCCTGTTTCTGTCTGAGACTCGATGATGGCATACCACAAC 22970
Query 79237 TCCCGGGCCCGGACAACCTTCTTGTACCGACCCT---GTGCGACGTACGTCCGGTACAAC 79293
| | | ||| ||| ||| ||| | ||||| || | | || ||| | |
Sbjct 22971 TGCTGAGCCTTGACCACCCGCTTCACTCTACCCTCCTGTTCATATTGAGT---GTAGAGC 23027
Query 79294 TCGTTGAAAGCCTCCCCATAGACA-TCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAG 79352
| | || ||||||| | ||| || || || |||||||| |||||||||||
Sbjct 23028 TTCTCAAACTCCTCCCCCCA-ACACTCATCCAACCCAGGGCACTCACTGGGGCACATCAG 23086
Query 79353 GTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGT 79412
|||||||| || || || ||| ||| |||||| || || |||||||| |||||
Sbjct 23087 AGACCAGTCCTGGTTGTTTTCCACCCTCTTCATGAACAGATCAGGGATCCATAGGGCATA 23146
Query 79413 GAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTC 79472
||||||||| || | | |||||| | || |||| |||||| || |||||
Sbjct 23147 GAAGAGGTCTCGTGCCCTCTGCTCCTCTTTACCAGTGTTCTTCTTCAGCTCAAGGAAGTC 23206
Query 79473 CATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCC 79532
| | || |||||| |||||||| || ||||| || | |||| || || |||
Sbjct 23207 AAACACATCAAAGTGCCATGGCTCCAGGTATATGGCAAAAGCACCCGGTCGTTTATTGCC 23266
Query 79533 GCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTC 79592
|| |||| ||||| || || ||||||||| | |||| ||||| ||||| | ||| |
Sbjct 23267 ACCTTGGTCCACGTAGCGTGCGGTGTTGTTGTACACTCTCAGCATCGGCACAAGGCCATT 23326
Query 79593 GGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGC--AGTG- 79649
| | || || || || || |||| | | | || | ||| | ||
Sbjct 23327 TGAGTTACCATTTGTTCCAGCAATGTAACTACCTGTTGATCTAA---TACAGCTAACTGC 23383
Query 79650 GATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGAT 79709
| || || || || | | || |||||| | || || | ||||| || || || ||
Sbjct 23384 TACACCAATCCCTCCTGCAGATTTAGAGATGAGAGCACATTGTTTGAGTGTATCATAAAT 23443
Query 79710 GCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTT 79769
||| || || ||| |||||||| || | |||||||||||| || | ||| || | ||
Sbjct 23444 GCCATCAATGCTGTCATCCTTCATGGCCAGCAGGAAGCAGCTGGAGAGCTGGGGTCTATT 23503
Query 79770 CGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATC 79829
|| || |||||||| || || || | || || ||||| |||| | || ||| |
Sbjct 23504 GGTGCCTGCGTTGAACAGAGTGGGAGAGGCATGAGTGAACCACTTCTCAGACAGCAGGTT 23563
Query 79830 GTACGTCTC 79838
||| |||||
Sbjct 23564 GTAGGTCTC 23572
Score = 150 bits (166), Expect = 2e-31
Identities = 344/515 (67%), Gaps = 6/515 (1%)
Strand=Plus/Minus
Query 19166 GAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAAC 19225
||||| ||| ||||| || |||||| ||||| || || | || || || ||||||
Sbjct 23572 GAGACCTACAACCTGCTGTCTGAGAAGTGGTTCACTCATGCCTCTCCCACTCTGTTCAAC 23513
Query 19226 GCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGC 19285
|| || || || | || ||| | || ||||| ||||| |||| |||||||||||||||
Sbjct 23512 GCAGGCACCAATAGACCCCAGCTCTCCAGCTGCTTCCTGCTGGCCATGAAGGATGACAGC 23453
Query 19286 ATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGT 19345
||||| ||||| || || || ||||| | || || | |||||| || | | || ||
Sbjct 23452 ATTGATGGCATTTATGATACACTCAAACAATGTGCTCTCATCTCTAAATCTGCAGGAGGG 23393
Query 19346 ATCGG-GATCCACT--GCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAAC 19402
|| || | || | ||| ||| | || | |||| || ||| || ||
Sbjct 23392 ATTGGTGTAGCAGTTAGCT---GTATTAGATCAACAGGTAGTTACATTGCTGGAACAAAT 23336
Query 19403 GGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTC 19462
|| | | || | || || ||||| | || | ||||||||| || | |||||
Sbjct 23335 GGTAACTCAAATGGCCTTGTGCCGATGCTGAGAGTGTACAACAACACCGCACGCTACGTG 23276
Query 19463 AACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCG 19522
|||| || ||| ||||| ||| | || ||||| ||||| ||||||||||||
Sbjct 23275 GACCAAGGTGGCAATAAACGACCGGGTGCTTTTGCCATATACCTGGAGCCATGGCACTTT 23216
Query 19523 GACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGC 19582
|| || | || ||||| || ||| |||| ||| | |||||| | | ||
Sbjct 23215 GATGTGTTTGACTTCCTTGAGCTGAAGAAGAACACTGGTAAAGAGGAGCAGAGGGCACGA 23156
Query 19583 GACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAA 19642
||||||||| ||| | ||||| || || || |||||| ||| ||| || || || |
Sbjct 23155 GACCTCTTCTATGCCCTATGGATCCCTGATCTGTTCATGAAGAGGGTGGAAAACAACCAG 23096
Query 19643 GAATGGCACCTGATGTGCCCGCACGAATGCCCTGG 19677
|| ||| ||||||||||| || ||||||||
Sbjct 23095 GACTGGTCTCTGATGTGCCCCAGTGAGTGCCCTGG 23061
>seq21590
Length=39673
Score = 87.8 bits (96), Expect = 2e-12
Identities = 78/98 (80%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 19253 AGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATCTACGAGACGCTCAAG 19312
|| |||||||| |||| |||||||||||||||||||||||||| ||||| || | |||
Sbjct 39310 AGTTGTTTCCTTTTGGCCATGAAGGATGACAGCATTGAGGGCATTTACGACACCTTGAAG 39369
Query 19313 GAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGG 19350
|||| || | ||||||||| | | ||||| || ||
Sbjct 39370 CAGTGTGCTCTCATCTCCAAATCTGCTGGGGGCATTGG 39407
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548204859197280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |