Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq27510 150 2e-31
seq44130 131 2e-25
>seq27510
Length=34911
Score = 150 bits (166), Expect = 2e-31
Identities = 163/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| ||||| ||||| || || || ||||| || ||| | || || || | ||
Sbjct 30134 ATGCAAATTTTTGTGAAGACCCTGACTGGGAAGACCATCACTTTGGAAGTGGAACCTAGT 30075
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| | ||||| || || |||||||| ||||| || ||||| ||||||
Sbjct 30074 GACACCATTGAGAATGTCAAGGCAAAGATCCAGGACAAAGAGGGTATCCCTCCTGACCAG 30015
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || ||||| ||||||||||| || || |||| ||| ||||| | ||||| ||
Sbjct 30014 CAGAGGCTGATTTTCGCTGGTAAGCAGCTTGAAGATGGTCGCACCCTCTCTGACTACAAC 29955
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGT 27621
| || ||||||||||| || || | || |||||
Sbjct 29954 ATTCAGAAGGAATCCACCCTCCACTTGGTGCTGCGT 29919
Score = 147 bits (162), Expect = 2e-30
Identities = 155/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| |||||||| ||||| || || || || || || ||| | || |||||| | |
Sbjct 30363 AATGCAGATCTTTGTTAAGACCCTGACTGGTAAAACCATCACTTTGGAAGTTGAGCCGAG 30304
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||| | |||| ||| ||||||| || || || || ||||| || || ||||| |||||
Sbjct 30303 TGACACAATTGAAAACGTGAAGGCCAAGATCCAAGATAAGGAAGGTATCCCTCCTGACCA 30244
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|||| | || |||||||||||||||||||| || |||| || || || | ||||| ||
Sbjct 30243 GCAGAGGCTGATTTTTGCTGGTAAGCAACTAGAAGATGGCCGCACTCTCTCTGACTACAA 30184
Query 27585 TGTCCAAAAGGAATCCACTCTTCA 27608
|||| ||||| ||||| || ||
Sbjct 30183 CATCCAGAAGGAGTCCACCCTCCA 30160
>seq44130
Length=14217
Score = 131 bits (144), Expect = 2e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|| || || ||||| || || || || || ||||| || ||||| |||| | | |
Sbjct 12059 ATACAGATTTTTGTGAAAACCCTCACTGGGAAGACCATCACTCTGCAGGTCAAACCCAGC 12000
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || || |||| | | || || |||||||||||||| || ||||| ||||| |||
Sbjct 11999 GACATCACTGAAAATGTTATAGCCAAGATTCAGGACAAGGAAGGCATTCCCCCAGATCAG 11940
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || || |||| ||| ||||| || || |||| || ||||| | ||||| ||
Sbjct 11939 CAGAGGCTGATCTTTGTTGGCAAGCAGCTTGAAGATGGCCGCACCCTCTCCGACTACAAC 11880
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
|||| || |||| ||| ||||| || ||| ||||||| | ||||| ||
Sbjct 11879 ATCCAGAAAGAATTCACCCTTCACCTTGTCCTGCGTCTCTGGGGTGGCCA 11830
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 569977752201440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |