Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014- 12-02] 46,662 sequences; 679,761,122 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq10050 82.4 6e-11 >seq10050 Length=29434 Score = 82.4 bits (90), Expect = 6e-11 Identities = 120/165 (73%), Gaps = 6/165 (4%) Strand=Plus/Minus Query 118534 AGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTG--TAGCTGGCTACATTAAAAG 118591 || ||||| | ||| || ||||||||||| | || || |||||||| | ||| |||| Sbjct 22568 AGTCCTGTGATGTGGGCGATCATGTATGTTA--GAAGTGAATAGCTGGCAATATTGAAAG 22511 Query 118592 GAACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTG 118651 | || ||||| |||||||| | || | ||| || | || || || ||||| || | | Sbjct 22510 GTACTCCCAGCCCCATGTCACCAGAGCGCTGATAAAGCTGACAGGACAGCTCACC-ATCG 22452 Query 118652 CA-ACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCATG 118695 || ||||| ||||||| | ||| ||||| |||||| ||||| Sbjct 22451 CACACATAGAACTGACAAAGAGCGTGGCATGGGGGCAGAGCCATG 22407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414241089893368