Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq44130 140 8e-28
seq27510 138 3e-27
seq9418 89.7 1e-12
seq26604 86.0 1e-11
>seq44130
Length=14217
Score = 140 bits (154), Expect = 8e-28
Identities = 160/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|||||||||||||| ||| | ||||| |||||||| || || | ||||| | ||||||
Sbjct 11848 AGGACAAGGTGAAGGGTGAATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 11907
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| | ||||| || | || || || || |||| ||||||||||||
Sbjct 11908 TCAAGCTGCTTGCCAACAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCC 11967
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| | | || ||||| || |||| | || |||| |||||||| |||
Sbjct 11968 TGAATCTTGGCTATAACATTTTCAGTGATGTCGCTGGGTTTGACCTGCAGAGTGATGGTC 12027
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| || ||||| || || ||||| | ||| || ||
Sbjct 12028 TTCCCAGTGAGGGTTTTCACAAAAATCTGTATGTT 12062
>seq27510
Length=34911
Score = 138 bits (152), Expect = 3e-27
Identities = 160/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 210902 TAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATC 210961
||| || | ||| || |||||||| || |||||||| || || | || || | |||||
Sbjct 30150 TAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGGCCATC 30209
Query 210962 TTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021
||| || ||||| || || || || || | || ||||||||||| | |||||||| ||
Sbjct 30210 TTCTAGTTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCAGGAGGGATACCTTCCTTATC 30269
Query 211022 CTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGT 211081
|||||||| ||||||||||| || |||||| ||||| || | |||||| ||
Sbjct 30270 TTGGATCTTGGCCTTCACGTTTTCAATTGTGTCACTCGGCTCAACTTCCAAAGTGATGGT 30329
Query 211082 CTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| || || || ||||| ||||| | |||||||||
Sbjct 30330 TTTACCAGTCAGGGTCTTAACAAAGATCTGCATTTT 30365
Score = 131 bits (144), Expect = 4e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| || ||||| || || || ||||| || || | ||||| | ||||||
Sbjct 29923 AGCACCAAGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCAGAGAGGGTGCGACCATCT 29982
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || ||||| || || | || ||||||||||| | || || ||||||
Sbjct 29983 TCAAGCTGCTTACCAGCGAAAATCAGCCTCTGCTGGTCAGGAGGGATACCCTCTTTGTCC 30042
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
||||||||| || || || || ||||||||| ||| || || | |||||| |||
Sbjct 30043 TGGATCTTTGCCTTGACATTCTCAATGGTGTCACTAGGTTCCACTTCCAAAGTGATGGTC 30102
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || ||||| ||||| | |||||
Sbjct 30103 TTCCCAGTCAGGGTCTTCACAAAAATTTGCAT 30134
>seq9418
Length=8239
Score = 89.7 bits (98), Expect = 1e-12
Identities = 84/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070
|| ||||| ||||||||||| ||||| || ||||||||||| | || ||||||
Sbjct 3531 CCCTCCTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCGCTGGGCTCGACCTCG 3590
Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| ||||| ||||| |||||||||||||| || || | |||||| ||
Sbjct 3591 AGGGTGATGGTCTTCCCCGTGAGAGTCTTCACGAAGATCTGCATGTT 3637
>seq26604
Length=24774
Score = 86.0 bits (94), Expect = 1e-11
Identities = 137/194 (71%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 139822 GGAAGAGGAGGACAATCTGCTCTGCGTTTTGAAAGACTTCGAAAGGAAAAGAGGCACAAC 139881
|| ||||||||||| |||||||| ||||||| | || ||| ||||||||| ||||||
Sbjct 19583 GGTAGAGGAGGACAGTCTGCTCTTCGTTTTGCTCGTCTGAGAATGGAAAAGAGACACAAC 19524
Query 139882 TACTTGAGAAAAGTTGCAGAGAACGCAATACAG---TGTTTTATCAAAGACAACAAGTGT 139938
||| |||| ||||| || || | ||| | ||| | | || ||| |||| |||| |
Sbjct 19523 TACGTGAGGAAAGTGGCTGAAACGGCAGTGCAGCTCTTTGTTTCCAATGACA--AAGT-T 19467
Query 139939 TTTGTTTCTGGTATTGTTTTGGCAGGTTCCGCAGAGTTCAAGACAAAGCTCCTGGAATCT 139998
||| | || || || |||| || || || || ||||| || | ||| | |||
Sbjct 19466 AATGTGGCAGGAATGGTCCTGGCTGGATCTGCTGACTTCAAAACTGAACTCAGCCAGTCT 19407
Query 139999 GACTTTTTTGACCC 140012
||| | ||||| ||
Sbjct 19406 GACATGTTTGATCC 19393
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1158458993007630
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |