Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq27510 104 2e-17
seq44130 86.0 4e-12
>seq27510
Length=34911
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
||||||||||| || ||||| ||||| || || ||||| |||||| | |||||||| |
Sbjct 30365 AAAATGCAGATCTTTGTTAAGACCCTGACTGGTAAAACCATCACTTTGGAAGTTGAGCCG 30306
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
| ||||| |||||| | || || || || || |||||| | || || ||
Sbjct 30305 AGTGACACAATTGAAAACGTGAAGGCCAAGATCCAAGATAAGGAAGGTATCCCTCCTGAC 30246
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| ||| | | || ||||| || || ||||| ||||| | |||||| | || |||
Sbjct 30245 CAGCAGAGGCTGATTTTTGCTGGTAAGCAACTAGAAGATGGCCGCACTCTCTCTGACTAC 30186
Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||||| || || |||||||| | || || || || | || |||||||
Sbjct 30185 AACATCCAGAAGGAGTCCACCCTCCACTTGGTGCTACGTCTGAGAGGAGG 30136
>seq44130
Length=14217
Score = 86.0 bits (94), Expect = 4e-12
Identities = 141/201 (70%), Gaps = 2/201 (1%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| || |||||||| || ||||||||||| || || || |||||||| | || | ||
Sbjct 12062 AACATACAGATTTTTGTGAAAACCCTCACTGGGAAGACCATCACTCTGCAGGTCAAACCC 12003
Query 23668 ACGGACA-CTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
| |||| | | |||| ||| | | || ||| ||||| ||||| | || |||||
Sbjct 12002 AGCGACATCACTGAAAATGTTATAGC-CAAGATTCAGGACAAGGAAGGCATTCCCCCAGA 11944
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
||| ||| | | || |||| ||||| || || ||||| | ||||| | ||| ||
Sbjct 11943 TCAGCAGAGGCTGATCTTTGTTGGCAAGCAGCTTGAAGATGGCCGCACCCTCTCCGACTA 11884
Query 23787 CAACATACAAAAAGAGTCCAC 23807
|||||| || ||||| | |||
Sbjct 11883 CAACATCCAGAAAGAATTCAC 11863
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337817376264296
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |