Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq10050 122 7e-23
seq11547 102 7e-17
>seq10050
Length=29434
Score = 122 bits (134), Expect = 7e-23
Identities = 126/165 (76%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 29713 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 29772
||| || |||| ||| || |||||||| || || || || |||||||| || || || ||
Sbjct 22569 TAGTCCTGTGATGTGGGCGATCATGTATGTTAGAAGTGAATAGCTGGCAATATTGAAAGG 22510
Query 29773 CACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCT 29832
|| || ||||||||||| || || | ||| || ||||| || || ||||| || ||||
Sbjct 22509 TACTCCCAGCCCCATGTCACCAGAGCGCTGATAAAGCTGACAGGACAGCTCACCATCGCA 22450
Query 29833 CACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAG 29877
||| || |||||||| | || ||||| || || || ||||||||
Sbjct 22449 CACATAGAACTGACAAAGAGCGTGGCATGGGGGCAGAGCCATGAG 22405
>seq11547
Length=21244
Score = 102 bits (112), Expect = 7e-17
Identities = 119/161 (74%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 29717 CCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACC 29776
|| |||| ||| || |||||||| || | || | ||||| || || | || || ||
Sbjct 14641 CCTGTGATGTGGGCGATCATGTATGTTACAAGTGCATAGCTAGCAATACTGAAAGGTACT 14582
Query 29777 CCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTCACG 29836
|| ||||||||||| || || | ||| | ||||| || || ||||| || ||||||||
Sbjct 14581 CCCAGCCCCATGTCACCAGAGCGCTGATTAAGCTGACAGGACAGCTCACCATCGCTCACA 14522
Query 29837 TAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAG 29877
|| |||||||| | || ||||| || || || ||||||||
Sbjct 14521 TAGAACTGACAAAGAGCCTGGCATGGGGGCAGAGCCATGAG 14481
Score = 82.4 bits (90), Expect = 6e-11
Identities = 98/133 (74%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076
|| || |||||||| || || || || || || ||||||||||| || | || ||
Sbjct 14257 AAGTGTCTCCACTGAAAGCCATAGACAGGCCCAAGGTCTCCCTCCTCTCAGTTAGTAAAT 14198
Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136
|| | ||||||| ||||| | || || |||||||||| ||||| ||||| || |
Sbjct 14197 CCACCATTGTCCAGGAAGTCACGAGAGCCACTGGCGTCCCAAATCTTCACCCCTTTTGCA 14138
Query 30137 GAGAGCTCTTTGG 30149
|||||||||||||
Sbjct 14137 GAGAGCTCTTTGG 14125
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405932217780532
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |