Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq10050 140 2e-28
seq11547 114 1e-20
>seq10050
Length=29434
Score = 140 bits (154), Expect = 2e-28
Identities = 130/165 (79%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 27207 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 27266
||| || |||| ||| || |||||||| || || || || |||||||| || || || ||
Sbjct 22569 TAGTCCTGTGATGTGGGCGATCATGTATGTTAGAAGTGAATAGCTGGCAATATTGAAAGG 22510
Query 27267 TACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCT 27326
||| || ||||||||||| || || | ||| || |||||||| || ||||| |||||||
Sbjct 22509 TACTCCCAGCCCCATGTCACCAGAGCGCTGATAAAGCTGACAGGACAGCTCACCATCGCA 22450
Query 27327 TACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAG 27371
|| || |||||||| | |||||||| || || |||||||||||
Sbjct 22449 CACATAGAACTGACAAAGAGCGTGGCATGGGGGCAGAGCCATGAG 22405
Score = 98.7 bits (108), Expect = 7e-16
Identities = 114/154 (74%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548
||||| ||||||||||| || || || ||||| || || || || || || || |||||
Sbjct 22027 CATGTTTGTGTACTCTGCCCCAAAGTGTCTCCACTGAAAGCCATAGACAGGCCCAAGGTC 21968
Query 27549 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 27608
|||||| || | || || || | ||||||| || || | || || ||||||||
Sbjct 21967 TCCCTCCTCTCGGTTAGTAAATCCATTGTTGTCCAGGAACTCACGAGAGCCATTGGCGTC 21908
Query 27609 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTG 27642
||| ||||| ||||| || | ||||||||||||
Sbjct 21907 CCAAATCTTCACCCCTTTTGCAGAGAGCTCTTTG 21874
>seq11547
Length=21244
Score = 114 bits (126), Expect = 1e-20
Identities = 122/161 (76%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 27211 CCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACC 27270
|| |||| ||| || |||||||| || | || | ||||| || || | || |||||
Sbjct 14641 CCTGTGATGTGGGCGATCATGTATGTTACAAGTGCATAGCTAGCAATACTGAAAGGTACT 14582
Query 27271 CCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTTACG 27330
|| ||||||||||| || || | ||| | |||||||| || ||||| |||||||| ||
Sbjct 14581 CCCAGCCCCATGTCACCAGAGCGCTGATTAAGCTGACAGGACAGCTCACCATCGCTCACA 14522
Query 27331 TAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAG 27371
|| |||||||| | || ||||| || || |||||||||||
Sbjct 14521 TAGAACTGACAAAGAGCCTGGCATGGGGGCAGAGCCATGAG 14481
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369297063795722
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |