Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014- 12-02] 46,662 sequences; 679,761,122 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq11038 684 0.0 seq15624 129 8e-25 >seq11038 Length=78219 Score = 684 bits (758), Expect = 0.0 Identities = 1337/1964 (68%), Gaps = 25/1964 (1%) Strand=Plus/Plus Query 77059 TATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGAT 77118 ||||||| || || || ||||||| || || || | | | || ||||| || | Sbjct 22162 TATTCTTCATCTCCTCGTTCCACAGCCCCCGTTCAGTGAGGTCCTTCAGCAGATGTGGGT 22221 Query 77119 TAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTT 77178 | || || ||||| |||||||| | |||||||| ||||| || || ||||| || | || Sbjct 22222 TTACAATCTGAAACTCTCCAGAGAGGACTCTACGTGTGTAGATGTTGCTGGTGTAGGCTT 22281 Query 77179 CCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCA 77238 | | || |||||||| || | ||||| || || || || || ||||| || |||| || Sbjct 22282 CGATGGACTCATTGTTGCCGAGTATTTGTGCTGTGGAGGCTGTGGGCATGGGGGCCAACA 22341 Query 77239 ATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAA 77298 | | ||| ||||| | ||| ||| | || || || || || ||||| ||||| | Sbjct 22342 ACAGACTGTTTCTCACACCGTGTTTAGCAATCTTCTCCTTAAGCAGCTTCCAGTCCCAGA 22401 Query 77299 GATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATC 77358 | || | || || ||||| | || || || ||||| || |||| | || | Sbjct 22402 GCTCAGTGGGCACCTTTTCCCACATGTCATACTGCAGAATGCCTCTACTCACTGGAGAGC 22461 Query 77359 CATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTC 77418 | ||||| |||||||| || ||| |||| || | || || || || |||| || Sbjct 22462 CTGGGTATGTCTCATAAGGCCCATCTTTTTCTGCCAACTCCCAGCTTGCCTCCAGGGCAG 22521 Query 77419 CGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACG 77478 | || || || || || || |||| |||| || || |||||| || ||||| | Sbjct 22522 CATAGTAGATGGTCTCAAAGATCTGGATATTCAGCAGCTGGGCTTCAGGGCTTTCAAATG 22581 Query 77479 GATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTAT 77538 ||||| | | || || ||||||||||| | ||||| || ||||| || || || || | Sbjct 22582 GATAACGCATGAGGATGAAGGCATCTGCAAGACCCTGCACACCAATCCCGATTGGCCTGT 22641 Query 77539 GTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTAT 77598 | | ||| || ||| | | ||||| |||| || || || |||||||| || || || | Sbjct 22642 GGCGCTTGTTTGAATTCTCTGCTTCAGGAACTGGGTAGTAGTTAATGTCAATGATCTTGT 22701 Query 77599 TGAGATTTCTAACAACTACTTTA---ACCACGTC---CTTTAGTTTAAGAAAATCAAATC 77652 |||| ||||| |||| ||||||| ||| | | |||| || ||| ||||| Sbjct 22702 TGAGGTTTCTTACAATTACTTTAGTGACCGAGGCAAGCTTT--TTGAAG----TCAAAGG 22755 Query 77653 TTCCATCTA---TAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCT 77709 | | || ||||| ||||||| | ||| || || || | ||||| || || || | Sbjct 22756 TGCGTTCCGGAGTAACATACATGTTGAGAGCAATGGAGGCCAAGTTACAGACGGCCACTT 22815 Query 77710 CATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCA 77769 ||| | | | ||| | | ||||| || || | ||||| |||||||| ||||||| Sbjct 22816 CATCTTTGCTTGTATACTCCACAATCTCAGTGCACAAGTTACTGCATTTGATGGTGCCCA 22875 Query 77770 GATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGG 77829 ||| || ||||| ||||| | || || | || || || | || | || || || | Sbjct 22876 AATTCTGCTGGTTACTCTTCCTGTTACAGGCATCTTTGTACAACATGTAAGGTGTTCCTG 22935 Query 77830 TTTCAATCTGTGATTCGATAATAGATTTCCAGACGACT-CT-AGCTTTTATCATAGATTT 77887 |||| |||| || ||||| || | | ||| | ||| || ||| || | || || Sbjct 22936 TTTCTGTCTGAGACTCGATGATGGCATACCACA--ACTGCTGAGCCTTGACCACCCGCTT 22993 Query 77888 GTATCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATC 77947 || | ||| |||||||||||| || ||| ||||| || || |||||| || Sbjct 22994 CACTCTACCCTCCTGTTCATATTGAGTGTAGAGCTTCTCAAACTCCTCCCCCCAACACTC 23053 Query 77948 ATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCG 78007 |||||| |||||||| ||| | |||||||||| |||||||| | | | || | Sbjct 23054 ATCCAACCCAGGGCACTCACTGGGGCACATCAGAGACCAGTCCTGGTTGTTTTCCACCCT 23113 Query 78008 TTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTC 78067 ||||| || |||||||| |||||||| ||| || || ||||| | || || || || Sbjct 23114 CTTCATGAACAGATCAGGGATCCATAGGGCATAGAAGAGGTCTCGTGCCCTCTGCTCCTC 23173 Query 78068 ATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAG 78127 || || || ||||| || || || || || || | | |||| | |||||||| || || Sbjct 23174 TTTACCAGTGTTCTTCTTCAGCTCAAGGAAGTCAAACACATCAAAGTGCCATGGCTCCAG 23233 Query 78128 ATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTT 78187 ||||| || | | | || ||||||||||| || || || || | || | |||||||| Sbjct 23234 GTATATGGCAAAAGCACCCGGTCGTTTATTGCCACCTTGGTCCACGTAGCGTGCGGTGTT 23293 Query 78188 ATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATA 78247 || || ||||||| ||| || | || || || || | ||||||||||||| ||| || Sbjct 23294 GTTGTACACTCTCAGCATCGGCACAAGGCCATTTGAGTTACCATTTGTTCCAGCAATGTA 23353 Query 78248 ACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATAT 78307 ||| || ||| | |||| |||| | || || || |||||||| ||||| || Sbjct 23354 ACTACCTGTTGATCTAATACAGCTAACTGCTACACCAATCCCTCCTGCAGATTTAGAGAT 23413 Query 78308 TAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAG 78367 ||||| || |||| | |||||| || || || || || ||||||||| ||||| || Sbjct 23414 GAGAGCACATTGTTTGAGTGTATCATAAATGCCATCAATGCTGTCATCCTTCATGGCCAG 23473 Query 78368 AAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGC 78427 || || ||||| || | || | | || ||||| || || | || ||||| || Sbjct 23474 CAGGAAGCAGCTGGAGAGCTGGGGTCTATTGGTGCCTGCGTTGAACAGAGTGGGAGAGGC 23533 Query 78428 ATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCA 78487 ||| || ||||| || ||||| || || ||||| || ||||| |||| ||||| || Sbjct 23534 ATGAGTGAACCACTTCTCAGACAGCAGGTTGTAGGTCTCAATGGCTGCATCTATATCAGT 23593 Query 78488 TTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATT 78547 | || ||||| || ||||| | ||| | ||| ||||| || | ||| || ||| Sbjct 23594 GTTGTGGATTCCAACAGCTACTCTCATGAGCATGTGCTGTGGGCGCTCAGCCACTTTACC 23653 Query 78548 ATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAA 78607 ||| ||||||| || ||| || || || || ||||| ||||| | ||||| ||||| Sbjct 23654 ATTGATTTTCAGCAGGTAGGAGCGCTCTAATGTCTTAAAGCCAAAGAAATTGTAAGAAAA 23713 Query 78608 GTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTA--ACAATATCC 78665 || || || ||||| ||| |||| || || |||||| |||| | |||||||| Sbjct 23714 ATCCCTATCATAAATTATAGCAGAGTTGAGGCGGTCTTTG--TTTGCAAGGACAATATCT 23771 Query 78666 A-TGACAGTAGTTGAAATAATAGGAGATCGTACACCATTTTTAGGATTAACATAGTTAAA 78724 | | | | | || || || || || | |||| |||||| ||||||| || Sbjct 23772 AGGGTCTCTTG-GGAGATCATGGGGGAGTGGCGCTTATTTAAAGGATTGACATAGTGGAA 23830 Query 78725 TAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGC 78784 | ||| ||||| |||||||| || | || || || || || || || || || ||||| Sbjct 23831 CAGATCCTCCATGACATCACTGAACACCTTCTTGGTCTCTTTATGGAGGTTGGACACAGC 23890 Query 78785 TATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATTTC 78844 || | |||||| || || |||||||| || || | || || ||||| || || || Sbjct 23891 AATCCGTGCAGCCAGGATGGCATAATCTGGGTGCTTCGTGGTCAGTGTGGCAGCAATCTC 23950 Query 78845 TGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATATAGTCCTTGAATAACTTT 78904 ||| || | | || ||||| | ||| || || || | || || ||||| || || || Sbjct 23951 TGCAGCAAGTGTGTCCAACTCCACAGTGGTCACTCCGCTGTACAGACCTTGGATCACCTT 24010 Query 78905 CATGGCGATTTTGACAGGATCTACAAACTCAGTGTTCAATCCATAACATAATTTTCTAAT 78964 ||| | ||||| || || |||||||| | || | |||||||| | || || Sbjct 24011 CATCGTGATTTGTGTGGGGTCCACAAACTCTGCATTGAGCCCATAACAGAGCTTCTGGAT 24070 Query 78965 ACGAGATGTGATTTTATCAAATATAACATTCTCCTTGCATCCAT 79008 ||||| |||||||||||||| || || ||||| || ||||| Sbjct 24071 TCGAGAGGTGATTTTATCAAACATGACGCGCTCCTGGCGTCCAT 24114 Score = 102 bits (112), Expect = 1e-16 Identities = 124/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 76849 TCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATAT 76908 |||| || || || |||||||| |||| |||| ||| | || || || |||||||||| Sbjct 21872 TCCAACCATAAAAGTGCATGCTGGTCAATTTGCCATAGTTTGGCTCTGCAATATGAATAT 21931 Query 76909 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 76968 | | ||||| ||||| || ||| |||| || | || || ||||| || | | |||| Sbjct 21932 TTAGGGACTGGCTTTGGTCAATGTAAGCACCGCGGTCGGCAGCCATCTTGAGTACAGTCT 21991 Query 76969 TTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGG 77017 | || | |||||||||| |||||| | | ||||| | ||||||||| Sbjct 21992 TCTGTGATATTTCCCAAACAGTTTTATACAACTGTTTTAAATCATCTGG 22040 >seq15624 Length=12484 Score = 129 bits (142), Expect = 8e-25 Identities = 149/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 77339 TCCGTTACTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTC 77398 ||| || ||| || || ||| |||||||||||||||||| ||| |||||||||| Sbjct 11320 TCCTTTGCTAACAGGAGAGCCAGCATATGTTTCATAAGGTCCATCTTGGGCAGCTAGTTC 11379 Query 77399 ACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTG 77458 ||| || || ||||| || | |||||||| || || ||||||| | ||||||| || Sbjct 11380 ACAGCTGGCCTCCAAAGCAGCATAATAAATGGTCTCAAAAATCTGGATGTTGAGATGCTG 11439 Query 77459 TGCTTCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAAC 77518 || | ||| || || |||||| | | ||||| ||||| || || | |||||||| Sbjct 11440 GGCCTTTTCACTTTCGAATGGATAACGCATGAGAATGAAGGCGTCCGCAAGACCCTGAAC 11499 Query 77519 TCCAATACCAATAGGTCTATG 77539 ||||| ||||||||||| || Sbjct 11500 ACCAATCCCAATAGGTCTGTG 11520 Score = 102 bits (112), Expect = 1e-16 Identities = 125/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 76849 TCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATAT 76908 |||| || ||||| ||||||||||| |||||| ||| | || || || |||||||| | Sbjct 10335 TCCACCCATAGAAGTGCATGCTTGTGAGTTTGCCATAGTTTGGTTCAGCAATATGAATGT 10394 Query 76909 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 76968 ||| ||||| || || || || | || || | || |||||||| || | | ||| Sbjct 10395 TCAGAGACTGGCTCTGGTCAATATATGCACCACGGTCGGCCGCCATCTTAAGGACAATCT 10454 Query 76969 TTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 77019 | |||| |||||||||| ||||||| | | || || | |||||| |||| Sbjct 10455 TCTGAGAGATTTCCCAAACAGTTTTGTAGAGCTGCTTTAGATCATCAGGAA 10505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694263617055680