Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014- 12-02] 46,662 sequences; 679,761,122 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq11038 677 0.0 seq15624 114 2e-20 seq19576 111 2e-19 seq21590 84.2 3e-11 >seq11038 Length=78219 Score = 677 bits (750), Expect = 0.0 Identities = 1357/1995 (68%), Gaps = 31/1995 (2%) Strand=Plus/Plus Query 75626 TGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATTCCACAATTTTCTC 75685 || |||||||| | || || || ||||||| ||||| || ||||||| | Sbjct 22134 TGTATGGATCCATTTTGAGCAATGATCTTATTCTTCATCTCCTCGTTCCACAGCCCCCGT 22193 Query 75686 TCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTT 75745 || || | | | || ||||| || || ||||| ||||| |||||||| | ||||| Sbjct 22194 TCAGTGAGGTCCTTCAGCAGATGTGGGTTTACAATCTGAAACTCTCCAGAGAGGACTCTA 22253 Query 75746 CGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCA 75805 || ||||| || || ||||| || | ||| | || |||||||| || | ||||| || Sbjct 22254 CGTGTGTAGATGTTGCTGGTGTAGGCTTCGATGGACTCATTGTTGCCGAGTATTTGTGCT 22313 Query 75806 GTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATT 75865 || || || || ||||| || |||| ||| | ||| ||||| | ||| ||| | || Sbjct 22314 GTGGAGGCTGTGGGCATGGGGGCCAACAACAGACTGTTTCTCACACCGTGTTTAGCAATC 22373 Query 75866 TTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTAT 75925 || || || || ||||| ||||| || || | || || ||||| | || || Sbjct 22374 TTCTCCTTAAGCAGCTTCCAGTCCCAGAGCTCAGTGGGCACCTTTTCCCACATGTCATAC 22433 Query 75926 TGTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCA 75985 || ||||| || | || | || || ||||| || |||| ||| || ||||| Sbjct 22434 TGCAGAATGCCTCTACTCACTGGAGAGCCTGGGTATGTCTCATAAGGCCCATCTTTTTCT 22493 Query 75986 GCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTA 76045 || | || || || ||||| | ||| | || || || || || || |||| |||| Sbjct 22494 GCCAACTCCCAGCTTGCCTCCAGGGCAGCATAGTAGATGGTCTCAAAGATCTGGATATTC 22553 Query 76046 AGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGT 76105 || || |||||| | || ||||| |||||| | | || || || |||||||| || Sbjct 22554 AGCAGCTGGGCTTCAGGGCTTTCAAATGGATAACGCATGAGGATGAAGGCATCTGCAAGA 22613 Query 76106 CCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATA 76165 ||||| || ||||| || || || || || | ||| || ||| | || ||||| |||| Sbjct 22614 CCCTGCACACCAATCCCGATTGGCCTGTGGCGCTTGTTTGAATTCTCTGCTTCAGGAACT 22673 Query 76166 GGGTAATAATTAATATCTATAATTTTATTGAGATTTCTGACAACTACTTTA---ACCACG 76222 ||||| || ||||| || || || || ||||| ||||| |||| ||||||| ||| | Sbjct 22674 GGGTAGTAGTTAATGTCAATGATCTTGTTGAGGTTTCTTACAATTACTTTAGTGACCGAG 22733 Query 76223 TC---CTTTAGTTTGAGAAAATCAAATTTTCCATCTA---TCACAAACATATTAAGAGCT 76276 | |||| |||| | ||||| | | || | ||| |||| || ||||| Sbjct 22734 GCAAGCTTT---TTGA---AGTCAAAGGTGCGTTCCGGAGTAACATACATGTTGAGAGCA 22787 Query 76277 ATAGATGCTAGATTACAAACGGCTACCTCAT--TAGCATTGGCATATTGTATTATCTCCG 76334 || || || | ||||| ||||| || |||| | || | | ||| | | ||||| | Sbjct 22788 ATGGAGGCCAAGTTACAGACGGCCACTTCATCTTTGCTT--GTATACTCCACAATCTCAG 22845 Query 76335 TGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATG 76394 |||| | ||||| || ||||| || || | ||| || ||||| ||||| ||||||| | Sbjct 22846 TGCACAAGTTACTGCATTTGATGGTGCCCAAATTCTGCTGGTTACTCTTCCTGTTACAGG 22905 Query 76395 AGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCC 76454 || || || | | | || ||||| ||||| |||| || ||||| || | | || Sbjct 22906 CATCTTTGTACAACATGTAAGGTGTTCCTGTTTCTGTCTGAGACTCGATGATGGCATACC 22965 Query 76455 AGACGACT-CT-AGCTTTTATTATAGATTTGTATCGCTTCTCTCTTTCATATTGTGTATA 76512 | | ||| || ||| || | | || || ||| ||||||||| || || Sbjct 22966 ACA--ACTGCTGAGCCTTGACCACCCGCTTCACTCTACCCTCCTGTTCATATTGAGTGTA 23023 Query 76513 TAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACAT 76572 | | ||||| || || |||||| |||||||| ||||| || ||| | || ||||| Sbjct 23024 GAGCTTCTCAAACTCCTCCCCCCAACACTCATCCAACCCAGGGCACTCACTGGGGCACAT 23083 Query 76573 CAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGC 76632 || ||||| || | | | |||| ||||| || |||||||| |||||||| || Sbjct 23084 CAGAGACCAGTCCTGGTTGTTTTCCACCCTCTTCATGAACAGATCAGGGATCCATAGGGC 23143 Query 76633 AATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAA 76692 | || || ||||| | || | || || || || || ||||| || || || ||||| Sbjct 23144 ATAGAAGAGGTCTCGTGCCCTCTGCTCCTCTTTACCAGTGTTCTTCTTCAGCTCAAGGAA 23203 Query 76693 CTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATT 76752 || | | |||| | |||||||| || || ||||| || | | |||||||||||||||| Sbjct 23204 GTCAAACACATCAAAGTGCCATGGCTCCAGGTATATGGCAAAAGCACCCGGTCGTTTATT 23263 Query 76753 ACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCC 76812 || || || || | || | || ||||| || || ||||||| ||| || | || ||| Sbjct 23264 GCCACCTTGGTCCACGTAGCGTGCGGTGTTGTTGTACACTCTCAGCATCGGCACAAGGCC 23323 Query 76813 GTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGA 76872 || || ||||||||||||||| ||| ||||| || || | |||| |||| | Sbjct 23324 ATTTGAGTTACCATTTGTTCCAGCAATGTAACTACCTGTTGATCTAATACAGCTAACTGC 23383 Query 76873 TAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGAT 76932 || || || |||||||| ||||||||| |||||||| |||| | ||| ||||| || Sbjct 23384 TACACCAATCCCTCCTGCAGATTTAGAGATGAGAGCACATTGTTTGAGTGTATCATAAAT 23443 Query 76933 GCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAAC 76992 ||| || || || |||||| ||||| || || || ||||| || | || | | Sbjct 23444 GCCATCAATGCTGTCATCCTTCATGGCCAGCAGGAAGCAGCTGGAGAGCTGGGGTCTATT 23503 Query 76993 AGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATT 77052 || ||||| || |||| || ||||| |||||||||||||| || ||||| || || || Sbjct 23504 GGTGCCTGCGTTGAACAGAGTGGGAGAGGCATGAGTGAACCACTTCTCAGACAGCAGGTT 23563 Query 77053 GTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAA 77112 ||| || ||||| |||| |||||||| | || ||||| ||||| || | ||| | Sbjct 23564 GTAGGTCTCAATGGCTGCATCTATATCAGTGTTGTGGATTCCAACAGCTACTCTCATGAG 23623 Query 77113 CATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAA 77172 ||| ||||| || || || | ||| ||| ||||||| || ||| || || || Sbjct 23624 CATGTGCTGTGGGCGCTCAGCCACTTTACCATTGATTTTCAGCAGGTAGGAGCGCTCTAA 23683 Query 77173 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAG 77232 || ||||| ||||| | ||||| ||||| || || || ||||| ||| | || || || Sbjct 23684 TGTCTTAAAGCCAAAGAAATTGTAAGAAAAATCCCTATCATAAATTATAGCAGAGTTGAG 23743 Query 77233 TTTGTCCTTATATTTGGTA--ACAATATCCA-TGACAGTGGTAGAAATAATTGGAGATCG 77289 ||| | | |||| | |||||||| | | | | | || || || || || | Sbjct 23744 GCGGTC--TTTGTTTGCAAGGACAATATCTAGGGTCTCTTG-GGAGATCATGGGGGAGTG 23800 Query 77290 TATTCCATTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGttt 77349 |||| |||||| ||||||| || | || ||||| || || || || | || Sbjct 23801 GCGCTTATTTAAAGGATTGACATAGTGGAACAGATCCTCCATGACATCACTGAACACCTT 23860 Query 77350 ttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGG 77409 || || || || || || || || || || || | ||||| || || ||||| || || Sbjct 23861 CTTGGTCTCTTTATGGAGGTTGGACACAGCAATCCGTGCAGCCAGGATGGCATAATCTGG 23920 Query 77410 ATGTTGTGTAGTGCAG-GTGGCTGCTATTTCTGCCGCTAAAGTATCTAATTCTATAGTAG 77468 || | || || ||| ||||| || || ||||| || | || || || || | ||| | Sbjct 23921 GTGCTTCGTGGT-CAGTGTGGCAGCAATCTCTGCAGCAAGTGTGTCCAACTCCACAGTGG 23979 Query 77469 TAACTCCGTTATATAGCCCTTGAATAACTTTCATGGCTATTTTGATAGGATCTACAAACT 77528 | |||||| | || || ||||| || || ||||| | |||| | || || ||||||| Sbjct 23980 TCACTCCGCTGTACAGACCTTGGATCACCTTCATCGTGATTTGTGTGGGGTCCACAAACT 24039 Query 77529 CGGTGTTCAAACCATAACATAATTTTCTAATACGAGATGTGATTTTATCAAACATGACAT 77588 | | || | |||||||| | || || ||||| |||||||||||||||||||| Sbjct 24040 CTGCATTGAGCCCATAACAGAGCTTCTGGATTCGAGAGGTGATTTTATCAAACATGACGC 24099 Query 77589 TCTCCTTACATCCAT 77603 ||||| | ||||| Sbjct 24100 GCTCCTGGCGTCCAT 24114 Score = 98.7 bits (108), Expect = 1e-15 Identities = 128/176 (73%), Gaps = 2/176 (1%) Strand=Plus/Plus Query 75444 TCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATAT 75503 |||| || || || |||||||| || | |||| ||| | || || || |||||||||| Sbjct 21872 TCCAACCATAAAAGTGCATGCTGGTCAATTTGCCATAGTTTGGCTCTGCAATATGAATAT 21931 Query 75504 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 75563 | | ||||| ||||| || ||| |||| || | || || ||||| || | | |||| Sbjct 21932 TTAGGGACTGGCTTTGGTCAATGTAAGCACCGCGGTCGGCAGCCATCTTGAGTACAGTCT 21991 Query 75564 TTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGATTT 75619 | || | |||||||||| |||||| | | ||||| | ||||||||| ||||| Sbjct 21992 TCTGTGATATTTCCCAAACAGTTTTATACAACTGTTTTAAATCATCTGG--GATTT 22045 >seq15624 Length=12484 Score = 114 bits (126), Expect = 2e-20 Identities = 146/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 75934 TCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTC 75993 ||| |||||| || || ||| ||||||||| |||| || || | |||||||||| Sbjct 11320 TCCTTTGCTAACAGGAGAGCCAGCATATGTTTCATAAGGTCCATCTTGGGCAGCTAGTTC 11379 Query 75994 GCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTG 76053 || || ||||| || ||| | |||||||| || || ||||||| | || |||| || Sbjct 11380 ACAGCTGGCCTCCAAAGCAGCATAATAAATGGTCTCAAAAATCTGGATGTTGAGATGCTG 11439 Query 76054 CGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAAC 76113 || | ||| || || |||||| | | ||||| || || || || || |||||||| Sbjct 11440 GGCCTTTTCACTTTCGAATGGATAACGCATGAGAATGAAGGCGTCCGCAAGACCCTGAAC 11499 Query 76114 TCCAATACCAATAGGTCTATG 76134 ||||| ||||||||||| || Sbjct 11500 ACCAATCCCAATAGGTCTGTG 11520 Score = 102 bits (112), Expect = 1e-16 Identities = 125/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 75444 TCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATAT 75503 |||| || ||||| ||||||||||| |||||| ||| | || || || |||||||| | Sbjct 10335 TCCACCCATAGAAGTGCATGCTTGTGAGTTTGCCATAGTTTGGTTCAGCAATATGAATGT 10394 Query 75504 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 75563 ||| ||||| || || || || | || || | || |||||||| || | | ||| Sbjct 10395 TCAGAGACTGGCTCTGGTCAATATATGCACCACGGTCGGCCGCCATCTTAAGGACAATCT 10454 Query 75564 TTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 75614 | |||| |||||||||| ||||||| | | || || | |||||| |||| Sbjct 10455 TCTGAGAGATTTCCCAAACAGTTTTGTAGAGCTGCTTTAGATCATCAGGAA 10505 >seq19576 Length=429644 Score = 111 bits (122), Expect = 2e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713 |||||||| || || | ||| || ||| | || |||||||||||||| || | |||||| Sbjct 417019 TCATCTCTGCTGATAAGTTCATTGGAATAAGTAAGCCCAGGCATTAGACCCCTCTTTTTC 416960 Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773 |||||| | || || || || |||||||| ||||| || || |||||||| || ||||| Sbjct 416959 AGCCAATAAATGGCGGCAAAGGATCCAGAGAAGAAAATTCCCTCTACAGCTGCAAATGCC 416900 Query 46774 ACAAGTCTCTCTCC 46787 |||| ||| || || Sbjct 416899 ACAATTCTTTCACC 416886 >seq21590 Length=39673 Score = 84.2 bits (92), Expect = 3e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053 || || ||||| |||| ||||| || || |||||||||||||| || || || || | | Sbjct 39214 GTGCCAGCATTGAACAGCGTAGGGGAGGCGTGAGTGAACCATTTCTCTGAGAGCAGGTGG 39155 Query 77054 TATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAAC 77113 || || || || |||| || || || || |||||| || ||||| || | ||| | | Sbjct 39154 TAGGTCTCGATGGCTGCGTCCATGTCTTGTTTATGAATCCCAACAGCCACTCTCATGAGC 39095 Query 77114 ATATGCTGAGG 77124 |||||||| || Sbjct 39094 ATATGCTGGGG 39084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712518563187840