Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq27510 104 5e-17
>seq27510
Length=34911
Score = 104 bits (114), Expect = 5e-17
Identities = 153/214 (71%), Gaps = 7/214 (3%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || || || ||||| || ||||||||||| || | | ||| | ||||||||||
Sbjct 30156 CAAG-TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCTA 30214
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || || || || || |||||||||||||| | | ||| |||||||| ||||| |
Sbjct 30215 GTTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCAGGAGGGATACCTTCCTTATCTTGGA 30274
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATAGTTT 152073
| || || || | || | |||| ||| ||| ||||| | ||| || ||||
Sbjct 30275 TCTTGGCCTTCACGTTTTCAATTGTGTC---ACTCGGCTCAACTTCCAAAGTGATGGTTT 30331
Query 152074 TGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
| || || || ||||| || |||| |||||||||
Sbjct 30332 TACCAGTCAGGGTCTTAACAAAGATCTGCATTTT 30365
Score = 84.2 bits (92), Expect = 5e-11
Identities = 144/208 (69%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || || || || || || || |||||||| || | | || | |||||||| |
Sbjct 29928 CAAG-TGGAGGGTGGATTCCTTCTGAATGTTGTAGTCAGAGAGGGTGCGACCATCTTCAA 29986
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || || ||||| || |||||||||||||| | | ||| || || || || || |
Sbjct 29987 GCTGCTTACCAGCGAAAATCAGCCTCTGCTGGTCAGGAGGGATACCCTCTTTGTCCTGGA 30046
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| ||| |||||| |||| | | |||| | || ||||| | ||| || || || |
Sbjct 30047 TCTTTGCCTTGACATTCTCAATGGTGTCACTAGGTTCCACTTCCAAAGTGATGGTCTTCC 30106
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || || |||||||| || | |||||
Sbjct 30107 CAGTCAGGGTCTTCACAAAAATTTGCAT 30134
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153130980302202
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |