Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq27510 114 9e-21
seq44130 104 2e-17
>seq27510
Length=34911
Score = 114 bits (126), Expect = 9e-21
Identities = 165/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 44109 TTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG 44168
|||| ||||||| | || ||||| ||| || ||| ||||| || |||||||| || |
Sbjct 29906 TTCCTCCTCTCAAACGCAGCACCAAGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCAG 29965
Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228
||| ||| | || || |||||||| || || || |||| | |||||| || | ||
Sbjct 29966 AGAGGGTGCGACCATCTTCAAGCTGCTTACCAGCGAAAATCAGCCTCTGCTGGTCAGGAG 30025
Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCC 44287
| | ||| || || ||| ||||| ||| | | ||| | |||||||| | ||||
Sbjct 30026 GGATACCCTCTTTGTCCTGGATCTT-TGCCTTGACATTCTCAATGGTGTCACTAGGTTCC 30084
Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| |||| || || ||||| || || ||||||||||| || ||||||||
Sbjct 30085 ACTTCCAAAGTGATGGTCTTCCCAGTCAGGGTCTTCACAAAAATTTGCAT 30134
Score = 111 bits (122), Expect = 1e-19
Identities = 165/234 (71%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || |||||||| | | ||||| ||| || ||| |||||| |||||||||||
Sbjct 30129 TTGCATCCCTCCTCTCAGACGTAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTA 30188
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
|| | ||| ||| | || || || ||||| || ||||| |||| | |||||| ||
Sbjct 30189 GTCAGAGAGAGTGCGGCCATCTTCTAGTTGCTTACCAGCAAAAATCAGCCTCTGCTGGTC 30248
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283
| ||| | ||||||||| || ||||| ||||| || | || ||||| |
Sbjct 30249 AGGAGGGATACCTTCCTTATCTTGGATCTTGGCCTTCACGTTTTCAATTGTGTCACTCGG 30308
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || |||| || || || || || || |||||||| || ||||| |||||
Sbjct 30309 CTCAACTTCCAAAGTGATGGTTTTACCAGTCAGGGTCTTAACAAAGATCTGCAT 30362
>seq44130
Length=14217
Score = 104 bits (114), Expect = 2e-17
Identities = 153/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| |||||||| ||| || || ||||||||||| |||| ||| ||| | || ||
Sbjct 11851 ACAAGGTGAAGGGTGAATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCA 11910
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || ||||||||| | ||||||||||| || | |||||||| |||
Sbjct 11911 AGCTGCTTGCCAACAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGA 11970
Query 44249 ATCTTCTGCT-TCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||| | | || | || ||||| || || |||| || || || |||||
Sbjct 11971 ATCTT-GGCTATAACATTTTCAGTGATGTCGCTGGGTTTGACCTGCAGAGTGATGGTCTT 12029
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341
|| |||||||| ||||| || || || ||| ||
Sbjct 12030 CCCAGTGAGGGTTTTCACAAAAATCTGTATGTTG 12063
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359785675934454
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |