Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014- 12-02] 46,662 sequences; 679,761,122 total letters Query= NC_033176.1 Length=224064 Score E Sequences producing significant alignments: (Bits) Value seq38854 145 1e-29 seq7084 95.1 2e-14 >seq38854 Length=59830 Score = 145 bits (160), Expect = 1e-29 Identities = 172/233 (74%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 8315 ACGTTGCTACAGACTAGAGACTGAATAGTTGCGCTCTTGACGATCCCGAACCCCACGTCT 8374 |||||| | || ||||| ||| | | || | |||| ||| |||| ||||| | Sbjct 59644 ACGTTGTTGCACACTAGCTTCTGCAGCGAGGCCGTGTTGATGATGTCGAAGCCCACCTGG 59585 Query 8375 CCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTCGCCATGAGGCCT 8434 || ||||| ||||| |||||||| || | |||||||||||| |||| ||||||||||| Sbjct 59584 CCTCCGAAAGTGCTTGGCTTCCAATATTCAGGGGAGCAGATGGCGTTTCCCATGAGGCCT 59525 Query 8435 TTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATGGCGTTGGGACGG 8494 ||||||||||| || || |||| || | ||| |||| ||||| ||||| | | | | Sbjct 59524 TTGAGGGAGAAGGGGGCGCCCATTTCAACCATGGTCTCCCCGAAAATGGCATCCTGTCTG 59465 Query 8495 GGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCTCCGTA 8547 ||||| || |||| | || | |||||||||||| || || |||| ||| || Sbjct 59464 GGCTTCTCGACCAGCAGACCCGGGTACAGCTCCACGGCGTCCACGTGTCCATA 59412 Score = 100 bits (110), Expect = 4e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 9298 TTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATGAGC 9357 || || ||||| || || | |||||| || | |||||||| || |||||||||||||| Sbjct 56595 TTTAGCACATCACATACGCGGTTGTGCTCACGCAGCCAGATCGTAGCGTACATCATGAGT 56536 Query 9358 CCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGCACTTCG 9417 ||||| ||||||||||| || || ||||| || || | ||| | || || || | Sbjct 56535 CCAGGGACCAGGCCAAAGGCTTCGTGACCCACTGCAAACCGCTGGGACTCTGGGACGTGA 56476 Query 9418 GGAGGATAGATCATGTGCACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACCGTCA 9477 || || ||| ||||| ||| || || || || | |||||||||| ||||| | Sbjct 56475 GGGGGGTAGTGCATGTCCACACCAACCTCCTTCACTGTCGGGGGATACACCTCACCATTC 56416 Query 9478 ATCATCTG 9485 | |||||| Sbjct 56415 AGCATCTG 56408 >seq7084 Length=102118 Score = 95.1 bits (104), Expect = 2e-14 Identities = 160/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 8323 ACAGACTAGAGACTGAATAGTTGCGCTCTTGACGATCCCGAACCCCACGTCTCCGCCGAA 8382 ||| ||||| || | |||||| || ||||||| | || || ||||| || || Sbjct 52306 ACACACTAGTTTTTGCAGAGTTGCACTTTTGACGACCTGAAAGCCTGTCTCTCCTCCAAA 52365 Query 8383 GGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTCGCCATGAGGCCTTTGAGGGA 8442 || ||||||||||||||| |||||||||||| | || ||| | ||||| || || Sbjct 52366 TGTACTGGGCTTCCAGTACTCCGGGGAGCAGAGGGGATTTCCCAGCAAACCTTTTAGAGA 52425 Query 8443 GAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATGGCGTTGGGACGGGGCTTTTC 8502 || ||||| |||| ||| | || ||||| || |||||||| || || | || || Sbjct 52426 AAAAGGAGCGCCCATCTCCACCATACTCTCCCCAAAGATGGCTCCTGGCCGCGTTTTCTC 52485 Query 8503 CACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCTCCGTAAAGGGCC 8554 || || | || | || | ||||| ||| || | || || |||||| || Sbjct 52486 CAGCATCACACCTGAATAAAACTCCAGAGCGTCTATATCCCCATAAAGGTCC 52537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716458663684480