Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_033176.1
Length=224064
Score E
Sequences producing significant alignments: (Bits) Value
seq38854 145 1e-29
seq7084 95.1 2e-14
>seq38854
Length=59830
Score = 145 bits (160), Expect = 1e-29
Identities = 172/233 (74%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 8315 ACGTTGCTACAGACTAGAGACTGAATAGTTGCGCTCTTGACGATCCCGAACCCCACGTCT 8374
|||||| | || ||||| ||| | | || | |||| ||| |||| ||||| |
Sbjct 59644 ACGTTGTTGCACACTAGCTTCTGCAGCGAGGCCGTGTTGATGATGTCGAAGCCCACCTGG 59585
Query 8375 CCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTCGCCATGAGGCCT 8434
|| ||||| ||||| |||||||| || | |||||||||||| |||| |||||||||||
Sbjct 59584 CCTCCGAAAGTGCTTGGCTTCCAATATTCAGGGGAGCAGATGGCGTTTCCCATGAGGCCT 59525
Query 8435 TTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATGGCGTTGGGACGG 8494
||||||||||| || || |||| || | ||| |||| ||||| ||||| | | | |
Sbjct 59524 TTGAGGGAGAAGGGGGCGCCCATTTCAACCATGGTCTCCCCGAAAATGGCATCCTGTCTG 59465
Query 8495 GGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCTCCGTA 8547
||||| || |||| | || | |||||||||||| || || |||| ||| ||
Sbjct 59464 GGCTTCTCGACCAGCAGACCCGGGTACAGCTCCACGGCGTCCACGTGTCCATA 59412
Score = 100 bits (110), Expect = 4e-16
Identities = 135/188 (72%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 9298 TTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATGAGC 9357
|| || ||||| || || | |||||| || | |||||||| || ||||||||||||||
Sbjct 56595 TTTAGCACATCACATACGCGGTTGTGCTCACGCAGCCAGATCGTAGCGTACATCATGAGT 56536
Query 9358 CCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGCACTTCG 9417
||||| ||||||||||| || || ||||| || || | ||| | || || || |
Sbjct 56535 CCAGGGACCAGGCCAAAGGCTTCGTGACCCACTGCAAACCGCTGGGACTCTGGGACGTGA 56476
Query 9418 GGAGGATAGATCATGTGCACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACCGTCA 9477
|| || ||| ||||| ||| || || || || | |||||||||| ||||| |
Sbjct 56475 GGGGGGTAGTGCATGTCCACACCAACCTCCTTCACTGTCGGGGGATACACCTCACCATTC 56416
Query 9478 ATCATCTG 9485
| ||||||
Sbjct 56415 AGCATCTG 56408
>seq7084
Length=102118
Score = 95.1 bits (104), Expect = 2e-14
Identities = 160/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 8323 ACAGACTAGAGACTGAATAGTTGCGCTCTTGACGATCCCGAACCCCACGTCTCCGCCGAA 8382
||| ||||| || | |||||| || ||||||| | || || ||||| || ||
Sbjct 52306 ACACACTAGTTTTTGCAGAGTTGCACTTTTGACGACCTGAAAGCCTGTCTCTCCTCCAAA 52365
Query 8383 GGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTCGCCATGAGGCCTTTGAGGGA 8442
|| ||||||||||||||| |||||||||||| | || ||| | ||||| || ||
Sbjct 52366 TGTACTGGGCTTCCAGTACTCCGGGGAGCAGAGGGGATTTCCCAGCAAACCTTTTAGAGA 52425
Query 8443 GAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATGGCGTTGGGACGGGGCTTTTC 8502
|| ||||| |||| ||| | || ||||| || |||||||| || || | || ||
Sbjct 52426 AAAAGGAGCGCCCATCTCCACCATACTCTCCCCAAAGATGGCTCCTGGCCGCGTTTTCTC 52485
Query 8503 CACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCTCCGTAAAGGGCC 8554
|| || | || | || | ||||| ||| || | || || |||||| ||
Sbjct 52486 CAGCATCACACCTGAATAAAACTCCAGAGCGTCTATATCCCCATAAAGGTCC 52537
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 716458663684480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |