Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq27510 127 5e-24
seq44130 111 4e-19
>seq27510
Length=34911
Score = 127 bits (140), Expect = 5e-24
Identities = 152/205 (74%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||| ||||| || || || || || || ||||| | || |||||| |||
Sbjct 30131 CAAATTTTTGTGAAGACCCTGACTGGGAAGACCATCACTTTGGAAGTGGAACCTAGTGAC 30072
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| ||||| ||||| |||||| ||||||||||| || |||||||| ||||||||
Sbjct 30071 ACCATTGAGAATGTCAAGGCAAAGATCCAGGACAAAGAGGGTATCCCTCCTGACCAGCAG 30012
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || || ||||| || || ||||| |||||||| | || || | || || ||| |
Sbjct 30011 AGGCTGATTTTCGCTGGTAAGCAGCTTGAAGATGGTCGCACCCTCTCTGACTACAACATT 29952
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || ||||| || || || ||||
Sbjct 29951 CAGAAGGAATCCACCCTCCA-CTTG 29928
>seq44130
Length=14217
Score = 111 bits (122), Expect = 4e-19
Identities = 148/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| |||||||| ||||| || || || ||||| || |||| || | |||
Sbjct 12056 CAGATTTTTGTGAAAACCCTCACTGGGAAGACCATCACTCTGCAGGTCAAACCCAGCGAC 11997
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
| || || || || | | |||||||||||||| ||||| || || || || |||||
Sbjct 11996 ATCACTGAAAATGTTATAGCCAAGATTCAGGACAAGGAAGGCATTCCCCCAGATCAGCAG 11937
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || ||||| | || || ||||| |||||||| | || || |||| || ||| ||
Sbjct 11936 AGGCTGATCTTTGTTGGCAAGCAGCTTGAAGATGGCCGCACCCTCTCCGACTACAACATC 11877
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| ||||||| || || || |||||
Sbjct 11876 CAGAAAGAATTCACCCTTCACCTTGT 11851
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203011541026428
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |