Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq27510 114 1e-20
seq44130 105 6e-18
>seq27510
Length=34911
Score = 114 bits (126), Expect = 1e-20
Identities = 155/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 41647 ACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTC 41706
||| | ||||| || || ||| |||||||||||||| ||||| ||||||||||| |
Sbjct 29919 ACGCAGCACCAAGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCAGAGAGGGTGCGACC 29978
Query 41707 GTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTT 41766
|| || |||||||| || ||||| ||||| | ||| ||||| | || | | ||| ||
Sbjct 29979 ATCTTCAAGCTGCTTACCAGCGAAAATCAGCCTCTGCTGGTCAGGAGGGATACCCTCTTT 30038
Query 41767 GTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTAT 41826
|||| ||| ||| ||| | | | ||||| || | ||||| |||| || ||
Sbjct 30039 GTCCTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTAGGTTCCACTTCCAAAGTGAT 30098
Query 41827 CGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| || || ||||| ||||| || ||||| |||||
Sbjct 30099 GGTCTTCCCAGTCAGGGTCTTCACAAAAATTTGCAT 30134
>seq44130
Length=14217
Score = 105 bits (116), Expect = 6e-18
Identities = 158/222 (71%), Gaps = 2/222 (1%)
Strand=Plus/Plus
Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704
||||| | || || || || ||| || ||||| ||||| |||||||||||||||||
Sbjct 11842 AGACGCAGGACAAGGTGAAGGGTGAATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGG 11901
Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764
| || || ||||||||||| | || ||||| | ||| || || | ||||| || |||
Sbjct 11902 CCATCTTCAAGCTGCTTGCCAACAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCC 11961
Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAG-TGTCGCTCGACTCCACCTCCACCGT 41823
|||||| ||| | || ||| ||| || | ||||||| | | |||| || ||
Sbjct 11962 TTGTCC-TGAATCTTGGCTATAACATTTTCAGTGATGTCGCTGGGTTTGACCTGCAGAGT 12020
Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
|| || || || || || || || || |||||||| |||||
Sbjct 12021 GATGGTCTTCCCAGTGAGGGTTTTCACAAAAATCTGTATGTT 12062
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462034349634400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |