Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq20084 111 2e-19 >seq20084 Length=15297 Score = 111 bits (122), Expect = 2e-19 Identities = 97/121 (80%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 16986 CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCT 17045 ||||||| | ||||||||||||||| || || |||| ||||||||| |||||||||| Sbjct 12701 CCTCGTCGCGGCTGATAAGTTCGTTGGAGAAAGTCAGTCCGGGCATCAGGCCTCGTTTCT 12760 Query 17046 TTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACG 17105 | | ||| || || ||||||||||| ||||| ||||| || ||||| || | ||||| | Sbjct 12761 TCAGCCAGAAAATGGCGGCGAACGATCCAGAGAAGAAGATCCCCTCCACAGCAGCAAAGG 12820 Query 17106 C 17106 | Sbjct 12821 C 12821 Score = 91.5 bits (100), Expect = 2e-13 Identities = 73/88 (83%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 ||||| || |||||||| ||||||||||| || ||||| ||||||||||| || ||||| Sbjct 13119 ATATAGGTGTCGATGAGCAGGCTGTACATCTCAGAGTGGATGTTCTCCATTGCGATCTGG 13178 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTA 17321 ||||| || ||||| || || |||| || Sbjct 13179 AATCCATAGAAGCAGCGCGCCTCCGTTA 13206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517377009520800