Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq20084 111 2e-19
>seq20084
Length=15297
Score = 111 bits (122), Expect = 2e-19
Identities = 97/121 (80%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 16986 CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCT 17045
||||||| | ||||||||||||||| || || |||| ||||||||| ||||||||||
Sbjct 12701 CCTCGTCGCGGCTGATAAGTTCGTTGGAGAAAGTCAGTCCGGGCATCAGGCCTCGTTTCT 12760
Query 17046 TTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACG 17105
| | ||| || || ||||||||||| ||||| ||||| || ||||| || | ||||| |
Sbjct 12761 TCAGCCAGAAAATGGCGGCGAACGATCCAGAGAAGAAGATCCCCTCCACAGCAGCAAAGG 12820
Query 17106 C 17106
|
Sbjct 12821 C 12821
Score = 91.5 bits (100), Expect = 2e-13
Identities = 73/88 (83%), Gaps = 0/88 (0%)
Strand=Plus/Plus
Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293
||||| || |||||||| ||||||||||| || ||||| ||||||||||| || |||||
Sbjct 13119 ATATAGGTGTCGATGAGCAGGCTGTACATCTCAGAGTGGATGTTCTCCATTGCGATCTGG 13178
Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTA 17321
||||| || ||||| || || |||| ||
Sbjct 13179 AATCCATAGAAGCAGCGCGCCTCCGTTA 13206
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517377009520800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |