Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq20084 95.1 1e-14
seq19222 84.2 2e-11
>seq20084
Length=15297
Score = 95.1 bits (104), Expect = 1e-14
Identities = 96/125 (77%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 16220 AGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGT 16279
||| | ||||| | |||||||||||||||||| ||||| | || ||||| ||||||
Sbjct 12697 AGTACCTCGTCGCGGCTGATAAGTTCGTTGGAGAAAGTCAGTCCGGGCATCAGGCCTCGT 12756
Query 16280 TTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCA 16339
||||| | |||||| || || || || || || || ||||| || ||||| |||| |||
Sbjct 12757 TTCTTCAGCCAGAAAATGGCGGCGAACGATCCAGAGAAGAAGATCCCCTCCACAGCAGCA 12816
Query 16340 AAAGC 16344
|| ||
Sbjct 12817 AAGGC 12821
Score = 82.4 bits (90), Expect = 8e-11
Identities = 71/88 (81%), Gaps = 0/88 (0%)
Strand=Plus/Plus
Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531
||||| || || || || | |||||||| || ||||| |||||||| || || |||||
Sbjct 13119 ATATAGGTGTCGATGAGCAGGCTGTACATCTCAGAGTGGATGTTCTCCATTGCGATCTGG 13178
Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTA 16559
|||||||||||||| || ||||||| ||
Sbjct 13179 AATCCATAGAAGCAGCGCGCCTCCGTTA 13206
>seq19222
Length=928746
Score = 84.2 bits (92), Expect = 2e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 16226 TCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTT 16285
|| ||||||||||||||||| |||||| |||| | || |||||| || | || ||
Sbjct 773893 TCATCTCTGCTGATAAGTTCATTGGAATAAGTAAGGCCAGGCATTAGACCCCTCTTTTTC 773834
Query 16286 AACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGC 16344
| ||| | || |||||||| || || || ||||| || ||||| |||| |||||| ||
Sbjct 773833 AGCCAATAAATGGCAGCAAAGGATCCAGAGAAGAAAATTCCCTCTACAGCTGCAAATGC 773775
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511247806759200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |