Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq10742 104 4e-17 >seq10742 Length=3397572 Score = 104 bits (114), Expect = 4e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | ||||| || || || || || || ||| | ||| ||||| ||| | Sbjct 2148903 ATGCAGATCTTTGTTAAGACCCTGACTGGGAAGACCATCACTTTGGAGGTTGAACCAAGT 2148844 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | ||| ||||||||||| ||||| ||||| || |||||||| Sbjct 2148843 GACACCATTGAGAATGTGAAAGCCAAAATTCAAGACAAAGAGGGTATTCCTCCTGATCAG 2148784 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || ||||| ||||| || || || || |||| ||| | || || | || || || Sbjct 2148783 CAGAGGCTGATTTTCGCTGGTAAGCAGCTAGAAGATGGCCGCACTCTCTCTGACTACAAC 2148724 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || || || || || | || |||| ||||| | |||| || || Sbjct 2148723 ATCCAGAAGGAGTCCACCCTCCACCTGGTGCTACGTCTGAGAGGAGGGAT 2148674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755209910208000