Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq4874 129 5e-25
seq10742 104 2e-17
seq18279 82.4 7e-11
>seq4874
Length=535125
Score = 129 bits (142), Expect = 5e-25
Identities = 154/208 (74%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590
|||| |||| ||||| ||||| || |||||||| ||| | ||||| ||| || |
Sbjct 502010 CAAGATGGAGGGTAGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCAA 501951
Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650
||||||| ||||| |||| || | |||||||||||| || ||||||||||| ||| |
Sbjct 501950 GCTGTTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCCTCCTTATCTTGGA 501891
Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710
| || |||||| | || | ||||| || ||| ||||| | ||| | |||||||
Sbjct 501890 TCTTGGCTTTAACATTCTCAATAGTGTCGCTGGGCTCCACCTCAAGGGTAATGGTTTTGC 501831
Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| || || ||||| ||||| ||||||||
Sbjct 501830 CAGTGAGGGTTTTCACAAAGATCTGCAT 501803
>seq10742
Length=3397572
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
||||| | |||| || ||||||||||| || || || |||||||||||||| ||
Sbjct 2148449 CCTCCTCTCAATCGCAGCACCAAGTGGAGGGTGGATTCCTTTTGAATGTTGTAGTCTGAG 2148508
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| ||||| ||| || ||||| || |||||| | || || | ||| || || |||||
Sbjct 2148509 AGGGTGCGACCATCTTCAAGCTGCTTACCAGCGAAAATCAGCCTCTGTTGGTCAGGAGGG 2148568
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691
|| ||||| ||||| || ||| || || | ||| | |||||| | || |||
Sbjct 2148569 ATACCCTCTTTGTCCTGGATCTTTGCCTTGACGTTTTCAATGGTGTCACTAGGTTCCACC 2148628
Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| | || | || || || ||||| || || ||||| ||||||||
Sbjct 2148629 TCCAAAGTGATGGTCTTCCCAGTCAGGGTCTTAACAAAGATCTGCAT 2148675
>seq18279
Length=91511
Score = 82.4 bits (90), Expect = 7e-11
Identities = 71/88 (81%), Gaps = 0/88 (0%)
Strand=Plus/Plus
Query 118549 CTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGA 118608
|||| || |||||||| ||| || |||||| |||||| |||||||| || ||| |||
Sbjct 1810 CTTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATCCTCCAGCTGTTTGCCGGCGAAGA 1869
Query 118609 TGAGACGCTGCTGATCGGGAGGTATGCC 118636
| |||||||||||||| ||||| || ||
Sbjct 1870 TCAGACGCTGCTGATCAGGAGGGATTCC 1897
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433692612753520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |