Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq19978 104 4e-17 >seq19978 Length=287087 Score = 104 bits (114), Expect = 4e-17 Identities = 129/174 (74%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 51885 GATAGCCAGAGCATTATGGTTGTACTATATATCCAAAGGGATAGAATACTTGGATACGGT 51944 ||||||| ||| | |||| |||||| || || ||||| | || | |||| || || Sbjct 68498 GATAGCCTCAGCTCTTTGGTGGTACTACATTTCTAAAGGAGTGGAGTTTCTGGACACTGT 68557 Query 51945 ATTTTTCATACTTAGGAAAAAATTTAATCAGGTTAGTTTTCTACACGTATATCATCATTT 52004 ||||||||| | |||||||| || || || || || |||||||| || || ||||| | Sbjct 68558 ATTTTTCATTTTGAGGAAAAAGTTCAACCAAGTAAGCTTTCTACATGTCTACCATCACTG 68617 Query 52005 TACTATGTTTACTCTAG-GATGGATAGGTATTAAATGGTTTGCTGGAGGTCAGG 52057 |||||||| | ||| | | ||||| || ||||||||| | | ||||| |||| Sbjct 68618 CACTATGTTCA-TCTTGTGGTGGATTGGCATTAAATGGGTCCCCGGAGGACAGG 68670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 922896068642400