Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq18889 89.7 1e-12 >seq18889 Length=1054283 Score = 89.7 bits (98), Expect = 1e-12 Identities = 190/284 (67%), Gaps = 0/284 (0%) Strand=Plus/Minus Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877 ||| ||||||||| || |||||||| ||| || || | || ||||| |||| || Sbjct 965536 TACAATTTCTTTGGCTTTAAAACGCTAGAGCGCTCTTACTTGCTGAAAATCAATGGTAAA 965477 Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937 | | || || ||||||||| | ||| |||| |||||||| || ||||| ||| Sbjct 965476 GTGGCTGAGCGCCCACAGCACATGCTCATGAGAGTAGCTGTCGGAATCCACAACTCTGAT 965417 Query 248938 ATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACA 248997 ||||| | | ||||| |||| | || ||| ||| | || |||||| | Sbjct 965416 ATAGATGCAGCCATTGAGACCTACAACCTGCTGTCTGAGAAGTGGTTCACTCATGCCTCT 965357 Query 248998 CCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCC 249057 || || || |||||||| || || || ||||| | ||||| || || ||| Sbjct 965356 CCCACTCTGTTCAACGCAGGCACTAACAGACCCCAGCTCTCCAGCTGCTTCCTGCTGGCC 965297 Query 249058 ATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACA 249101 ||| | || ||| | || |||||||||||||| || ||||| Sbjct 965296 ATGAAGGATGACAGCATTGATGGCATTTATGACACACTGAAACA 965253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073407876110080