Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq4874 96.9 3e-15 >seq4874 Length=535125 Score = 96.9 bits (106), Expect = 3e-15 Identities = 147/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 18123 TGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGT 18182 || || || |||||||| || ||||||||||||| | || | |||||| | ||| Sbjct 502005 TGGAGGGTAGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCAAGCTGT 501946 Query 18183 TTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGT 18242 ||||| ||| |||| || || || ||||| ||| | ||| |||||||| || | | Sbjct 501945 TTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCCTCCTTATCTTGGATCT-T 501887 Query 18243 TGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGT 18301 || || || | ||| |||||| | |||||| |||| ||| ||| ||||||| || Sbjct 501886 GGCTTTAACATTCTCAATAGTGTCGCTGGGCTCCACCTCAAGGGTAATGGTTTTGCCAGT 501827 Query 18302 CAATGTTTTTACAAAAATTTGCATTTT 18328 | ||||| ||||| || ||||| || Sbjct 501826 GAGGGTTTTCACAAAGATCTGCATATT 501800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379223517974700