Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq18889 668 0.0
seq22773 118 1e-21
seq19222 111 2e-19
seq20084 96.9 5e-15
>seq18889
Length=1054283
Score = 668 bits (740), Expect = 0.0
Identities = 1339/1978 (68%), Gaps = 29/1978 (1%)
Strand=Plus/Plus
Query 65087 CTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCT 65146
||| ||||||||| | || || | | ||||||| ||||| || ||||| | |
Sbjct 963962 CTGTATGGATCCATTTTGAGCAATGAGCTTATTCTTCATCTCCTCGTTCCACAGCCCCCG 964021
Query 65147 CTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCT 65206
|| |||| | | || ||||| || || || | ||||| |||||||||| |||||
Sbjct 964022 TTCAGTTAGGTCCTTCAGCAGATGTGGGTTTACAATCTGAAACTCTCCAGACAGGACTCT 964081
Query 65207 CCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGC 65266
|| ||||| || || ||||| || | ||| | |||||||| || || | ||||| ||
Sbjct 964082 GCGTGTGTAGATGTTGCTGGTGTAGGCTTCGATGGACTCATTGTTGCCAAGTATTTGCGC 964141
Query 65267 AGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGAT 65326
|| || || || |||||||| |||| ||| | || || || | ||||| | | ||
Sbjct 964142 TGTGGAGGCTGTGGGCATAGGGGCCAACAACAGGCTGTTCCTCACACCGTGTTTAGCAAT 964201
Query 65327 TTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNN 65386
|| || || || | | ||| | ||| || || | || ||
Sbjct 964202 CTTCTCCTTAAGCAGCTTCCAGTCCCAGAGCTCAGTGGGCACCTTTTCCCACATGTCGTA 964261
Query 65387 TTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTC 65446
||| ||||| || |||| | || ||| ||||| || || || || ||||| ||
Sbjct 964262 TTGCAGAATGCCCCTACTCACTGGGGAGCCTGGGTATGTCTCATAAGGCCCGTCCTTTTC 964321
Query 65447 AGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATT 65506
|| | || || || ||||| | ||| | || || |||||||| ||||||| ||||
Sbjct 964322 TGCCAACTCGCAGCTTGCCTCCAGGGCAGCATAGTAGATGGTTTCAAAGATCTGGATATT 964381
Query 65507 TAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAA 65566
|| || ||||| || |||||||||||| | ||| || || || ||||| |
Sbjct 964382 CAGCAGCTGGGCTTCAGAACTTTCAAATGGATAACGCATGAGGATGAAGGCATCTGCAAG 964441
Query 65567 TCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAAT 65626
|| || ||||| || || || || || || | ||| || || | || ||||| ||||
Sbjct 964442 ACCCTGCACACCGATCCCAATTGGCCTGTGGCGCTTGTTTGAATTCTCTGCTTCAGGAAC 964501
Query 65627 AGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTT---GACCA- 65682
|| || || ||||| || || || |||||||||||||| ||||||||||| |||
Sbjct 964502 TGGGTAGTAGTTAATGTCAATGATCTTATTGAGATTTCTTACAATTACTTTAGTGACTGA 964561
Query 65683 --CATCCTTCAGTTTGAGAAAATCAAAT---CGCTCATCTATTACAAACATGTTCAATGC 65737
|| ||| ||||| ||||||| || || | ||| ||||||| | ||
Sbjct 964562 GGCAAGCTT---TTTGA---AATCAAAGGTGCGTTCTGGAGTAACATACATGTTGAGAGC 964615
Query 65738 AACAGATGCCAGATTACAAACGGCTACCTCAT--TAGCATCCGCATATTGTATTATCTCA 65795
|| || |||| ||||| |||||||| |||| | || | | ||| | | ||||||
Sbjct 964616 AATTGAGGCCAAGTTACAGACGGCTACTTCATCTTTGCTT--GTATACTCCACAATCTCA 964673
Query 65796 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 65855
||||| | ||||| || |||||||| || ||||| || || |||||||| |||||||
Sbjct 964674 GTGCACAAGTTACTGCATTTGATGGTGCCCAAATTCTGCTGGTTACTCTTCCTGTTACAG 964733
Query 65856 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 65915
||||| || || | ||| | || || || ||||| ||||||| ||||| || || | |
Sbjct 964734 GCATCTTTGTACAACATGTAAGGTGTTCCCGTTTCTGTCTGAGACTCTATGATGGCATAC 964793
Query 65916 CAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATAC 65975
|| || ||||||| | | || ||| || ||| ||| |||| |||
Sbjct 964794 CACACCTGCTGAGCCTTGACCACCCGCTTCACTCTACCCTCCTGTTCATATCGTGTGTAC 964853
Query 65976 AATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATC 66035
| || ||||| || |||||| | ||||| ||||| || ||| |||||||||
Sbjct 964854 AGCTTCTCAAACTCCTCCCCCCAACACTCATCCAACCCAGGGCACTCACTGGGACACATC 964913
Query 66036 AACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCT 66095
|| ||||| || || | | ||||| ||||| || || ||||| ||||| || ||
Sbjct 964914 AAAGACCAGTCCTGGTTGTTTTCCACTCTCTTCATGAACAGGTCAGGGATCCATAGGGC- 964972
Query 66096 ATA-AATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 66154
||| || | |||| | || || ||||| || || || ||||| || || || || ||
Sbjct 964973 ATAGAAGAGGTCTCGCGCCCTCTGCTCCTCTTTACCAGTGTTCTTCTTCAGCTCAAGAAA 965032
Query 66155 CGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 66214
| | | |||| | ||||| || |||||||| ||||| | | || || ||||| ||
Sbjct 965033 GTCAAACACATCAAAGTGCCATGGCTCCAAGTAAATGGCAAAGGCACCCGGTCGTTTATT 965092
Query 66215 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 66274
|| || || || | || | || ||||| || || ||||||| ||| || | || |||
Sbjct 965093 GCCACCTTGGTCCACATAGCGTGCAGTGTTGTTGTACACTCTCAGCATCGGCACAAGACC 965152
Query 66275 ATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGA 66334
||| || ||||||| || || | || || ||||| ||| | |||| |||| ||
Sbjct 965153 ATTTGAGTTACCATTTGTTCCAGCAATGTAACTTCCTGTTGATCTAATACAGCTAACTGC 965212
Query 66335 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 66394
|| ||| || || ||||| ||||||||| | || ||| |||| | || ||||| ||
Sbjct 965213 TACACCAATCCCTCCTGCAGATTTAGAGATAAGAGCACATTGTTTCAGTGTGTCATAAAT 965272
Query 66395 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 66454
||| || || || |||||| ||||| || || || ||||| || | ||| | | |
Sbjct 965273 GCCATCAATGCTGTCATCCTTCATGGCCAGCAGGAAGCAGCTGGAGAGCTGGGGTCTGTT 965332
Query 66455 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 66514
||| || || || || | || ||||| || || || ||||| || ||||| || || ||
Sbjct 965333 AGTGCCTGCGTTGAACAGAGTGGGAGAGGCATGAGTGAACCACTTCTCAGACAGCAGGTT 965392
Query 66515 GTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAA 66574
||| |||||||| |||| |||||||| | | || ||||| || || || | ||| |
Sbjct 965393 GTAGGTCTCAATGGCTGCATCTATATCAGAGTTGTGGATTCCGACAGCTACTCTCATGAG 965452
Query 66575 CATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAA 66634
||||||||| || | ||| | | || || ||||||| |||||| || || |
Sbjct 965453 CATGTGCTGTGGGCGCTCAGCCACTTTACCATTGATTTTCAGCAAGTAAGAGCGCTCTAG 965512
Query 66635 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 66694
|||||||| ||||| | ||||| ||||| || | || ||||| ||| | ||||||||
Sbjct 965513 CGTTTTAAAGCCAAAGAAATTGTAAGAAAAATCCCTATCATAAATTATAGCAGAGTTGAG 965572
Query 66695 TTTATCCTTATATTTGTTA--ACTACATCCATGGTAATACTT--GAAATAATCGGAGAAT 66750
|| | | |||| | || | ||| | ||| ||| || || || || || |
Sbjct 965573 GCGGTC--TTTGTTTGCAAGGACAAGATCTAGGGT--GTCTTGGGAGATCATGGGGGAGT 965628
Query 66751 GTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtt 66810
| | |||| |||||||||||||| ||| | ||||||||| || ||||| || | |
Sbjct 965629 GGCGCTTATTTAAAGGATTGACATAGTGGAACAGATCCTCCATGACGTCACTGAACACCT 965688
Query 66811 tttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCG 66870
| || || ||||| || |||||||| || || |||| || || | ||||||||||| |
Sbjct 965689 TCTTGGTCTCTTTATGGAGATTTGACACAGCAATTCGTGCAGCCAGGATGGCATAATCTG 965748
Query 66871 GATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTG 66930
| || | || || ||||| || || || || || || ||||||| || || || |
Sbjct 965749 GGTGCTTCGTGGTCAGTGTGGCAGCAATCTCTGCAGCAAGTGTGTCCAGCTCCACAGTGG 965808
Query 66931 TTACTCCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGAT 66990
| ||||| | || | |||||||| |||||||| | |||| | || || | | |
Sbjct 965809 TCACTCCGCTGTACAGACCTTGGATCACCTTCATCGTGATTTGTGTGGGGTCCACAAACT 965868
Query 66991 CAGTGTTTAAGCCATAACATAATTTTCTAATACGAGATGTGATTTTATCAAACATGAC 67048
| | || | |||||||| | || || ||||| ||||||||||||||||||||
Sbjct 965869 CCGCATTGAGCCCATAACAGAGCTTCTGGATTCGAGAGGTGATTTTATCAAACATGAC 965926
>seq22773
Length=730387
Score = 118 bits (130), Expect = 1e-21
Identities = 140/190 (74%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 65419 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 65478
||||||| || || ||||| || | ||||||||||||| || ||||| || ||| | |
Sbjct 299790 CATATGTTTCATAAGGTCCATCTTGGGCAGCTAGTTCACAGCTGGCCTCCAAAGCAGCAT 299849
Query 65479 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGAT 65538
|||||||||| || || |||| | || |||| || || || || ||||||||||
Sbjct 299850 AATAAATGGTCTCAAAAATCTGGATGTTGAGATACTGGGCCTCTTCACTTTCAAATGGAT 299909
Query 65539 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 65598
|| | |||||| || ||||| || | || |||||||| || || |||||||| || |
Sbjct 299910 AACGCATGAGAATGAAGGCGTCCGCAAGACCCTGAACACCGATCCCAATAGGTCTGTGGC 299969
Query 65599 TCTTATTAGA 65608
| | |||||
Sbjct 299970 GCATGTTAGA 299979
Score = 89.7 bits (98), Expect = 7e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 65781 TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTA 65840
|||| || ||||||||||| || || || |||||||||| |||| ||| || || ||
Sbjct 300299 TATTCTACAATCTCAGTGCACAGGTTGCTGGACTTGATGGTGCCTAGATTCTGCTGGTTG 300358
Query 65841 CTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGAT 65900
||||| | || || ||||| || || || ||| |||| ||||| || || |||| ||
Sbjct 300359 CTCTTCCTATTGCATGCATCTTTGTAGAGCATGTATGGGGTACCCGTCTCTGTCTGTGAC 300418
Query 65901 TCTATAATCGCTTTCCA 65917
|| ||||| || | |||
Sbjct 300419 TCAATAATGGCATACCA 300435
Score = 84.2 bits (92), Expect = 3e-11
Identities = 98/130 (75%), Gaps = 2/130 (2%)
Strand=Plus/Plus
Query 66059 CACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATG 66118
||| ||||||||||| ||||| || ||||| ||||| | ||| | ||| | || ||| ||
Sbjct 300723 CACACGTTTCATAAAAAGATCTGGGATCCACAGAGCAAAAAACAGATCGCGGGCTCTCTG 300782
Query 66119 TTCCTCGTTTCCTGTATTCTT-TTTAAGATCGAGGAACGCCATAATATCATAATGCCACG 66177
||||| || || || || || |||||| || |||||| | | | |||| ||||||| |
Sbjct 300783 CTCCTCTTTACCAGTGTTTTTCTTTAAG-TCAAGGAACTCAAACACATCAAAATGCCATG 300841
Query 66178 GTTCCAAGTA 66187
| || | |||
Sbjct 300842 GCTCGAGGTA 300851
Score = 84.2 bits (92), Expect = 3e-11
Identities = 123/174 (71%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 66799 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAA 66858
|||| |||| ||| || || |||||||| | ||| || || || || | || || | |
Sbjct 301996 CACTGAATACTTTCTTGGTCTCTTTGTGCAAATTGGACACAGCGATGCGTGCAGCGAGGA 302055
Query 66859 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 66918
|||| || || || |||| || || || || || | || || || | ||||||||
Sbjct 302056 TGGCGTAGTCAGGGTGTTTGGTGGTCAGTGTAGCAGCGGTCTCTGCAGCTAAAGTGTCCA 302115
Query 66919 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCATAGCTATTT 66972
|||| || || || |||||| | || | || ||||| |||||||||| ||||
Sbjct 302116 ATTCCACAGTGGTCACTCCACTGTACAGCCCCTGGATCACCTTCATAGTGATTT 302169
>seq19222
Length=928746
Score = 111 bits (122), Expect = 2e-19
Identities = 106/136 (78%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 36180 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 36239
|||| ||||| || || | ||| |||||| | || || || |||||||| || | |||||
Sbjct 773895 CCTCATCTCTGCTGATAAGTTCATTGGAATAAGTAAGGCCAGGCATTAGACCCCTCTTTT 773836
Query 36240 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 36299
| |||||| | |||| ||||| |||||||| ||||||||||| ||||| || ||||| |
Sbjct 773835 TCAGCCAATAAATGGCAGCAAAGGATCCAGAGAAGAAAATTCCCTCTACAGCTGCAAATG 773776
Query 36300 CAATAAGTCTCTCTCC 36315
| | || ||| || ||
Sbjct 773775 CCACAATTCTTTCACC 773760
Score = 84.2 bits (92), Expect = 3e-11
Identities = 87/114 (76%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 36655 CACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATG 36714
||| || ||||||||||| || ||||||| ||||| || ||||| |||||||||||| |
Sbjct 772321 CACCTCCTCCACTGTCCAGAAGGATGCCTGTGCCTGCTTGTACATTTTCCAGATGTCAGG 772262
Query 36715 ATATTGAATTGGAAAAATAACAAATCTATTTTGATTTTTTGCAAGGATTGGTTC 36768
|| || || || || || |||||||| | |||||| | ||| | ||| ||
Sbjct 772261 GTACTGTATGGGGAACATCACAAATCTTCTGGGATTTTCTTGAAGCAGTGGCTC 772208
>seq20084
Length=15297
Score = 96.9 bits (106), Expect = 5e-15
Identities = 94/121 (78%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 36180 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 36239
||||||| | || || | ||||||||| || || ||||||||||| ||||| || || |
Sbjct 12701 CCTCGTCGCGGCTGATAAGTTCGTTGGAGAAAGTCAGTCCGGGCATCAGGCCTCGTTTCT 12760
Query 36240 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 36299
| ||||| || |||| || || |||||||| ||||| || || || || || |||||||
Sbjct 12761 TCAGCCAGAAAATGGCGGCGAACGATCCAGAGAAGAAGATCCCCTCCACAGCAGCAAAGG 12820
Query 36300 C 36300
|
Sbjct 12821 C 12821
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657958400210400
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