Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq21541 165 6e-36
seq20084 87.8 1e-12
>seq21541
Length=481625
Score = 165 bits (182), Expect = 6e-36
Identities = 231/323 (72%), Gaps = 6/323 (2%)
Strand=Plus/Plus
Query 91799 CATTTCCCTGTCTTTTCCTGCAAAGAGGACTACAACATCATCATGGACACTGTCAGACAA 91858
|||||||| ||||| |||||||||||||||| ||||||||| |||||| | |
Sbjct 478467 CATTTCCCAGTCTTCTCCTGCAAAGAGGACTGTGACATCATCACGGACACGGCGTCTAAG 478526
Query 91859 CTGGAACAAAGTGGCTTCTACTGGGGTCCTTTGGGGGTCGAGGAGGCACATCGTATGCTG 91918
||||| | || || ||||||||||||||| |||| || |||||||| || ||| |||
Sbjct 478527 CTGGAGCGCAGCGGGTTCTACTGGGGTCCTCTGGGCGTGGAGGAGGCTCACCGT---CTG 478583
Query 91919 CGCAACTCGG---CACTGGGCAGCTTTCTCATTCGGGATAGCAGGCAAAAGGACGTCTTG 91975
| ||| || | |||||||| ||||| || || || || | || |||||||| ||
Sbjct 478584 CTCAAAGAGGCTCCTCTGGGCAGTTTTCTGATCCGAGACAGTCGTCAGAAGGACGTGTTC 478643
Query 91976 TTCACGCTGTCGTATCACTCTGTGACCGGACCCGTCAGTGTGAGGATTGAATACAAGGAC 92035
||||| ||||| || ||||| || ||| || ||||| ||| | || || ||||| |
Sbjct 478644 TTCACTCTGTCCTACCACTCCAAGAGCGGCCCGGTCAGCGTGCGCATCGATTACAAAAAA 478703
Query 92036 AAGCAATTTTCCTTGGCTGGGAGCAAACAGAGGTTTTCATCGGTCCTTCTCCTGTTGGAC 92095
| | || ||| ||||||| | | | | || ||||| || || || |||||
Sbjct 478704 CACCGGTTCTCCCTGGCTGGAAACGAGCGCTCCTTCCCATCGCTCTTTGCTCTATTGGAA 478763
Query 92096 CATTACATCGGTGGGCCCAATAA 92118
||||||||| | |||||| ||
Sbjct 478764 CATTACATCAGCTCGCCCAAAAA 478786
>seq20084
Length=15297
Score = 87.8 bits (96), Expect = 1e-12
Identities = 92/121 (76%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 22748 TGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGC 22807
|||||||||| ||||| || || || | || ||||| || || || ||||| |||||||
Sbjct 12823 TGGCCTTTGCTGCTGTGGAGGGGATCTTCTTCTCTGGATCGTTCGCCGCCATTTTCTGGC 12764
Query 22808 TGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867
|||||||||| || ||||| || || | || |||||||| | || ||||| ||||
Sbjct 12763 TGAAGAAACGAGGCCTGATGCCCGGACTGACTTTCTCCAACGAACTTATCAGCCGCGACG 12704
Query 22868 A 22868
|
Sbjct 12703 A 12703
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356120457982180
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |