Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq18889 711 0.0
seq22773 127 3e-24
seq20084 102 1e-16
seq19222 89.7 7e-13
>seq18889
Length=1054283
Score = 711 bits (788), Expect = 0.0
Identities = 1354/1979 (68%), Gaps = 31/1979 (2%)
Strand=Plus/Plus
Query 78966 CTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCT 79025
||| ||||||||| | || || | | ||||||| ||||| || ||||| | |
Sbjct 963962 CTGTATGGATCCATTTTGAGCAATGAGCTTATTCTTCATCTCCTCGTTCCACAGCCCCCG 964021
Query 79026 CTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCT 79085
|| |||| | | || ||||| || || || | ||||| |||||||||| |||||
Sbjct 964022 TTCAGTTAGGTCCTTCAGCAGATGTGGGTTTACAATCTGAAACTCTCCAGACAGGACTCT 964081
Query 79086 CCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGC 79145
|| ||||| || || ||||| || | ||| | || ||||| || || | ||||| ||
Sbjct 964082 GCGTGTGTAGATGTTGCTGGTGTAGGCTTCGATGGACTCATTGTTGCCAAGTATTTGCGC 964141
Query 79146 AGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTGAT 79205
|| || || || |||||||| |||| ||| | || || || | ||||| | ||
Sbjct 964142 TGTGGAGGCTGTGGGCATAGGGGCCAACAACAGGCTGTTCCTCACACCGTGTTTAGCAAT 964201
Query 79206 TTTATCTTTTAG-AGATTCCCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCAT 79264
|| || || || || |||| | ||||| || |||| || || | ||| | || |
Sbjct 964202 CTTCTCCTTAAGCAGCTTCC-AGTCCCAGAGCTCAGTGGGCACCTTTTCCCACATGTCGT 964260
Query 79265 ATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTT 79324
|||| ||||| || |||| | || |||| |||||| |||||||| || |||||||
Sbjct 964261 ATTGCAGAATGCCCCTACTCACTGGGGAGCCTGGGTATGTCTCATAAGGCCCGTCCTTTT 964320
Query 79325 CGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTAT 79384
| || || || || || ||||| | || | || || |||||||| || |||| |||
Sbjct 964321 CTGCCAACTCGCAGCTTGCCTCCAGGGCAGCATAGTAGATGGTTTCAAAGATCTGGATAT 964380
Query 79385 TGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTA 79444
| || || ||||| || |||||||||||| | ||| || || || ||||| |
Sbjct 964381 TCAGCAGCTGGGCTTCAGAACTTTCAAATGGATAACGCATGAGGATGAAGGCATCTGCAA 964440
Query 79445 ATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAA 79504
|| || ||||| || || || || || || | ||| || ||| | || ||||| ||||
Sbjct 964441 GACCCTGCACACCGATCCCAATTGGCCTGTGGCGCTTGTTTGAATTCTCTGCTTCAGGAA 964500
Query 79505 TAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTATTACTTT---GACCA 79561
|| || || ||||| || || || ||||||||||| || || |||||||| |||
Sbjct 964501 CTGGGTAGTAGTTAATGTCAATGATCTTATTGAGATTTCTTACAATTACTTTAGTGACTG 964560
Query 79562 ---CATCCTTTAGTTTGAGAAAATCAAATCGTCCATCTA---TTACAAACATGTTCAACG 79615
|| |||| |||| ||||||| | ||| | ||| ||||||| | |
Sbjct 964561 AGGCAAGCTTT---TTGA---AATCAAAGGTGCGTTCTGGAGTAACATACATGTTGAGAG 964614
Query 79616 CGACAGATGCCAGATTACAAACGGCTACCTCAT--TAGCATCCGCATATTGTATTATTTC 79673
| | || |||| ||||| |||||||| |||| | || | | ||| | | || ||
Sbjct 964615 CAATTGAGGCCAAGTTACAGACGGCTACTTCATCTTTGCTT--GTATACTCCACAATCTC 964672
Query 79674 AGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACA 79733
|||||| | |||||| || || ||||| || ||||| || || |||||||| |||||||
Sbjct 964673 AGTGCACAAGTTACTGCATTTGATGGTGCCCAAATTCTGCTGGTTACTCTTCCTGTTACA 964732
Query 79734 CGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTT 79793
||||| || || | ||| | || || || ||||| ||||||| ||||| || || |
Sbjct 964733 GGCATCTTTGTACAACATGTAAGGTGTTCCCGTTTCTGTCTGAGACTCTATGATGGCATA 964792
Query 79794 CCAGACGACTCGAGCCTTTATTATAGACTTGTATCTCTTTTCTCTTTCGTATTGTGTATA 79853
||| || ||||||| | | ||| ||| || ||| ||| |||| ||
Sbjct 964793 CCACACCTGCTGAGCCTTGACCACCCGCTTCACTCTACCCTCCTGTTCATATCGTGTGTA 964852
Query 79854 TAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACAT 79913
| || ||||| || |||||| || || || ||||| || || ||||||||
Sbjct 964853 CAGCTTCTCAAACTCCTCCCCCCAACACTCATCCAACCCAGGGCACTCACTGGGACACAT 964912
Query 79914 CAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 79973
||| ||||| || | | | |||| ||||| || || ||||| ||||| || ||
Sbjct 964913 CAAAGACCAGTCCTGGTTGTTTTCCACTCTCTTCATGAACAGGTCAGGGATCCATAGGGC 964972
Query 79974 TATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGA 80032
||| || || |||| | || |||||||| || || || ||||| || || || || |
Sbjct 964973 -ATAGAAGAGGTCTCGCGCCCTCTGCTCCTCTTTACCAGTGTTCTTCTTCAGCTCAAGAA 965031
Query 80033 ACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGT 80092
| | | | |||| | ||||| || |||||||| ||||| | | ||||||||||| |
Sbjct 965032 AGTCAAACACATCAAAGTGCCATGGCTCCAAGTAAATGGCAAAGGCACCCGGTCGTTTAT 965091
Query 80093 TTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATAC 80152
| || || || || | || | || ||||| || || ||||||| ||| || | || ||
Sbjct 965092 TGCCACCTTGGTCCACATAGCGTGCAGTGTTGTTGTACACTCTCAGCATCGGCACAAGAC 965151
Query 80153 CATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTG 80212
|||| || ||||||| || || | || || ||||| | | | |||| |||| ||
Sbjct 965152 CATTTGAGTTACCATTTGTTCCAGCAATGTAACTTCCTGTTGATCTAATACAGCTAACTG 965211
Query 80213 ATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGA 80272
|| ||| || || ||||| ||||||||| | || ||| |||| | || ||||| |
Sbjct 965212 CTACACCAATCCCTCCTGCAGATTTAGAGATAAGAGCACATTGTTTCAGTGTGTCATAAA 965271
Query 80273 TGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAC 80332
|||| || ||||| ||||| ||||| || || || ||||| || | ||| | |
Sbjct 965272 TGCCATCAATGCTGTCATCCTTCATGGCCAGCAGGAAGCAGCTGGAGAGCTGGGGTCTGT 965331
Query 80333 TAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGAT 80392
|||| || || || || | || ||||| || || || ||||| || |||||||| || |
Sbjct 965332 TAGTGCCTGCGTTGAACAGAGTGGGAGAGGCATGAGTGAACCACTTCTCAGACAGCAGGT 965391
Query 80393 TGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTA 80452
|||| |||||||| |||| |||||||| | | || ||||| || || || | ||| |
Sbjct 965392 TGTAGGTCTCAATGGCTGCATCTATATCAGAGTTGTGGATTCCGACAGCTACTCTCATGA 965451
Query 80453 ACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCA 80512
||||||||| || | ||| | | || ||| ||||||| ||||||||| || |
Sbjct 965452 GCATGTGCTGTGGGCGCTCAGCCACTTTACCATTGATTTTCAGCAAGTAAGAGCGCTCTA 965511
Query 80513 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGA 80572
|||||||| ||||| | ||||| ||||| || | || ||||| ||| | |||||||
Sbjct 965512 GCGTTTTAAAGCCAAAGAAATTGTAAGAAAAATCCCTATCATAAATTATAGCAGAGTTGA 965571
Query 80573 GTTTATCCTTATATTTGTTA--ACTACATCCATGGTGATACTT--GAAATAATCGGAGAA 80628
| || | | |||| | || | ||| | |||| ||| || || || || ||
Sbjct 965572 GGCGGTC--TTTGTTTGCAAGGACAAGATCTAGGGTG--TCTTGGGAGATCATGGGGGAG 965627
Query 80629 TGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGt 80688
|| | |||| |||||| ||||||| ||| | ||||||||| || ||||| || |
Sbjct 965628 TGGCGCTTATTTAAAGGATTGACATAGTGGAACAGATCCTCCATGACGTCACTGAACACC 965687
Query 80689 ttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCT 80748
|| || || || || || |||||||| || || |||| || || | ||||||||||||
Sbjct 965688 TTCTTGGTCTCTTTATGGAGATTTGACACAGCAATTCGTGCAGCCAGGATGGCATAATCT 965747
Query 80749 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTT 80808
|| || | || || ||||| || || || || || || ||||||| || || ||
Sbjct 965748 GGGTGCTTCGTGGTCAGTGTGGCAGCAATCTCTGCAGCAAGTGTGTCCAGCTCCACAGTG 965807
Query 80809 GTTACTCCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGA 80868
|| ||||| | || | |||||||| |||||||| | |||| | || || | |
Sbjct 965808 GTCACTCCGCTGTACAGACCTTGGATCACCTTCATCGTGATTTGTGTGGGGTCCACAAAC 965867
Query 80869 TCAGTGTTTAAGCCATAACATAATTTTCTAATACGAGACGTGATTTTATCAAACATGAC 80927
|| | || | |||||||| | || || ||||| ||||||||||||||||||||
Sbjct 965868 TCCGCATTGAGCCCATAACAGAGCTTCTGGATTCGAGAGGTGATTTTATCAAACATGAC 965926
>seq22773
Length=730387
Score = 127 bits (140), Expect = 3e-24
Identities = 141/188 (75%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 79300 TATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAA 79359
||||||||||||||||| || | | |||| |||||| || ||||| || || | |||
Sbjct 299792 TATGTTTCATAAGGTCCATCTTGGGCAGCTAGTTCACAGCTGGCCTCCAAAGCAGCATAA 299851
Query 79360 TAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAA 79419
|||||||| || ||||||| | ||||||| || || ||| || ||||||||||||
Sbjct 299852 TAAATGGTCTCAAAAATCTGGATGTTGAGATACTGGGCCTCTTCACTTTCAAATGGATAA 299911
Query 79420 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 79479
| |||||| || ||||| || | || |||||||| || || |||||||| || | |
Sbjct 299912 CGCATGAGAATGAAGGCGTCCGCAAGACCCTGAACACCGATCCCAATAGGTCTGTGGCGC 299971
Query 79480 TTATTAGA 79487
| |||||
Sbjct 299972 ATGTTAGA 299979
Score = 91.5 bits (100), Expect = 2e-13
Identities = 99/129 (77%), Gaps = 2/129 (2%)
Strand=Plus/Plus
Query 79939 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 79998
|| ||||||||||| ||||| || ||||| ||||| | ||| ||||| | || ||| |||
Sbjct 300724 ACACGTTTCATAAAAAGATCTGGGATCCACAGAGCAAAAAACAGATCGCGGGCTCTCTGC 300783
Query 79999 TCCTCGTTTCCTGTATTCTT-TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 80057
||||| || || || || || |||||| || |||||| | | | |||| ||||||| ||
Sbjct 300784 TCCTCTTTACCAGTGTTTTTCTTTAAG-TCAAGGAACTCAAACACATCAAAATGCCATGG 300842
Query 80058 TTCCAAGTA 80066
|| | |||
Sbjct 300843 CTCGAGGTA 300851
>seq20084
Length=15297
Score = 102 bits (112), Expect = 1e-16
Identities = 97/124 (78%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041
||||||| | || || ||||||||||| || || ||||||||||| ||||| || || |
Sbjct 12701 CCTCGTCGCGGCTGATAAGTTCGTTGGAGAAAGTCAGTCCGGGCATCAGGCCTCGTTTCT 12760
Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101
| ||||| || |||| || || || ||||| |||||||| || || || || |||||||
Sbjct 12761 TCAGCCAGAAAATGGCGGCGAACGATCCAGAGAAGAAGATCCCCTCCACAGCAGCAAAGG 12820
Query 50102 CAAC 50105
| ||
Sbjct 12821 CCAC 12824
>seq19222
Length=928746
Score = 89.7 bits (98), Expect = 7e-13
Identities = 81/101 (80%), Gaps = 1/101 (1%)
Strand=Plus/Minus
Query 50454 ATCT-ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGT 50512
|||| || || ||||||||||| || ||||||| ||||| || ||||| ||||||||||
Sbjct 772325 ATCTCACCTCCTCCACTGTCCAGAAGGATGCCTGTGCCTGCTTGTACATTTTCCAGATGT 772266
Query 50513 CATGATATTGGATTGGGAAAATAACAAATCTATTTGGATTT 50553
|| | || || || ||||| || |||||||| | ||||||
Sbjct 772265 CAGGGTACTGTATGGGGAACATCACAAATCTTCTGGGATTT 772225
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718034823938400
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