Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq18889 127 3e-24
>seq18889
Length=1054283
Score = 127 bits (140), Expect = 3e-24
Identities = 346/523 (66%), Gaps = 20/523 (4%)
Strand=Plus/Minus
Query 96806 AACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCAC 96864
|||||| || ||| | | ||| || ||||| ||||| ||| ||||||| || || |||
Sbjct 965171 AACAAATGGTAACTCAAATGGTCTTGTGCCGATGCTGAGAGTGTACAACAACACTG-CAC 965113
Query 96865 GATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTT 96924
| || || || || ||||||||||| || || || | ||| | |||||||| || |
Sbjct 965112 GCTATGTGGACCAAGGTGGCAATAAACGACCGGGTGCCTTTGCCATTTACTTGGAGCCAT 965053
Query 96925 GGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCAC 96984
||||| || || ||||||||| | ||| || || ||| |||| | |||||| |
Sbjct 965052 GGCACTTTGATGTGTTTGACTTTCTTGAGCTGAAGAAGAACACTGG---TAAAGAGGAGC 964996
Query 96985 ---GAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGT-- 97039
| || | ||| | || ||||| || ||| | || || ||||||||||| | ||
Sbjct 964995 AGAGGGCGCGAGACCTCTTCTATGCCCTATGGATCCCTGACCTGTTCATGAAGAGAGTGG 964936
Query 97040 -CAACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATT 97098
||| || | ||||| | ||||| ||| || || || || || |
Sbjct 964935 AAAACAACCAGG---ACTGGTCTTTGATGTGTCCCAGTGAGTGCCCTGGGTTGGATGAGT 964879
Query 97099 GCTGGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGA 97158
| ||||| || ||||||||| |||||| || || || ||||| || ||||
Sbjct 964878 GTTGGGGGGAGGAGTTTGAGAAGCTGTACACACGATATGAACAGGAGGGTAGA---GTGA 964822
Query 97159 GACG---AGTCGATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTG 97215
|| ||| | || | | ||||| | |||||| | | ||||| ||| || |
Sbjct 964821 AGCGGGTGGTCAAGGCTCAGCAGGTGTGGTATGCCATCATAGAGTCTCAGACAGAAACGG 964762
Query 97216 GAACTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGG 97275
|||| || ||||| | ||||| ||| || || | || || ||||| | | ||||
Sbjct 964761 GAACACCTTACATGTTGTACAAAGATGCCTGTAACAGGAAGAGTAACCAGCAGAATTTGG 964702
Query 97276 GCACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTA 97318
|||||||||| || || ||||||| || ||||| |||||
Sbjct 964701 GCACCATCAAATGCAGTAACTTGTGCACTGAGATTGTGGAGTA 964659
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 740817799965600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |