Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_006150.1
Length=221454
Score E
Sequences producing significant alignments: (Bits) Value
seq22308 127 3e-24
>seq22308
Length=220414
Score = 127 bits (140), Expect = 3e-24
Identities = 168/233 (72%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 8705 ACGTTGCTACAGACTAGAGACTGGATAGTTGCACTCTTGACGATCCCAAACCCCACGTCT 8764
|||||| | || ||||| ||| | | || | |||| ||| | || |||||
Sbjct 57183 ACGTTGTTGCACACTAGCCTCTGCAGCGAGGCCGTGTTGATGATGTCGAAGCCCACCGGG 57124
Query 8765 CCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAGCAGATGACGTTCGCCATGAGGCCT 8824
|| ||||| ||||| || |||||||| | |||||||||||| |||| |||||||||||
Sbjct 57123 CCTCCGAAAGTGCTTGGCTTCCAGTATTCAGGGGAGCAGATGGCGTTTCCCATGAGGCCT 57064
Query 8825 TTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTCTCACCGAAGATGGCGTTGGGACGG 8884
|||||||| || || || |||| || | ||| |||| ||||| ||||||| | | |
Sbjct 57063 TTGAGGGAGAAGGGGGCACCCATTTCCACCATGGTCTCCCCGAAAATGGCGTCCTGTCTG 57004
Query 8885 GGCTTTTCCACCAAGAATCCGGTGTACAACTCCACAGCCTCGATGTCTCCGTA 8937
||||| || |||| | || | ||||| |||||| || || | || ||| ||
Sbjct 57003 GGCTTCTCGACCAGCAGACCCGGGTACAGCTCCACGGCATCCACGTGTCCATA 56951
Score = 89.7 bits (98), Expect = 7e-13
Identities = 129/181 (71%), Gaps = 1/181 (1%)
Strand=Plus/Minus
Query 9671 CTCGTTTCAGAACATCGCACACTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATCA 9730
||| ||| || ||||| || || | |||||| || | |||||||| |||||||||||||
Sbjct 54316 CTCCTTT-AGTACATCACATACGCGGTTGTGCTCACGCAGCCAGATCGTAGCGTACATCA 54258
Query 9731 TGAGACCAGGCACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATATTTTCGGGCA 9790
|||| ||||| ||||||||||| || || || || || || | ||| || | |
Sbjct 54257 TGAGCCCAGGGACCAGGCCAAAGGCTTCGTGCCCCACTGCAAACCGCTGGGACTCTGCGA 54198
Query 9791 CTTCGGGAGGATAGATCATGTGCACCTGGACATCTTTGACCGAGGGGGGATACATTTCAC 9850
| | || || ||| ||||| ||| || || | || | ||||||||||| ||||
Sbjct 54197 CGTGTGGGGGGTAGTGCATGTCCACACCAACGTCCCTCACTGTTGGGGGATACATCTCAC 54138
Query 9851 C 9851
|
Sbjct 54137 C 54137
Score = 87.8 bits (96), Expect = 3e-12
Identities = 92/121 (76%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 10305 GGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCGTAATAGGAGAGATTGGAG 10364
|| ||||||||||| | ||||| || || || ||| | | ||||||| | || ||
Sbjct 52465 GGTGTTGGACAATCCTCCGGAACAGGGGGGAGTGTCCGGGTGAAATAGGACAAGTTTGAA 52406
Query 10365 AAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTAGATGGGAGGGCTGTCAATCAAA 10424
| |||||||||||| ||| |||| |||||||||||| | || ||||||||||||| |
Sbjct 52405 TAGGCTTCCCAGCTTTTGTACCCGTAATCCGCGTTGTAGGTTGGTGGGCTGTCAATCATA 52346
Query 10425 T 10425
|
Sbjct 52345 T 52345
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 708293998046400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |