Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq20709 174 2e-39
seq24033 159 5e-35
seq17943 145 1e-30
seq23184 138 2e-28
seq19539 136 6e-28
seq17191 136 6e-28
seq21518 132 8e-27
>seq20709
Length=307029
Score = 174 bits (192), Expect = 2e-39
Identities = 201/271 (74%), Gaps = 0/271 (0%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|||||||||||| || | | ||| || ||||||||||| || ||||| || || |||||
Sbjct 35790 CGCTAAGCGTCACCGTAAAGTTCTCCGTGATAACATCCAGGGCATCACTAAACCCGCTAT 35849
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||||||||| ||||| || || |||||| |||| || || |||| || ||||
Sbjct 35850 CCGCCGTCTGGCTCGCCGTGGCGGTGTGAAGCGTATCTCCGGTCTGATCTACGAGGAGAC 35909
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
||| | ||| | ||| | ||||| ||| ||| |||| ||| || || ||| |||||
Sbjct 35910 TCGCGGTGTCCTTAAGGTTTTCCTGGAGAACGTGATCCGTGACGCCGTCACCTACACCGA 35969
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | |||||||| ||| ||||||| | || || || |||| | || ||
Sbjct 35970 GCACGCCAAGAGAAAGACTGTGACCGCCATGGACGTGGTGTACGCCCTGAAGAGACAGGG 36029
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCT 16702
||| | | || || || ||| ||||| ||
Sbjct 36030 CCGCACTCTGTACGGCTTCGGAGGTTAAACT 36060
Score = 150 bits (166), Expect = 3e-32
Identities = 194/268 (72%), Gaps = 0/268 (0%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| |||||||| || | ||| || ||||||||||| || || ||||| || |||||
Sbjct 40762 CGCCAAGCGTCACCGTAAGGTTCTCCGTGATAACATCCAGGGTATTACCAAACCCGCTAT 40821
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||||||||| || || || || |||||| |||| || || |||| || ||||
Sbjct 40822 CCGCCGTCTGGCTCGCCGCGGCGGTGTGAAGCGTATCTCCGGTCTGATCTACGAGGAGAC 40881
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | |||| | ||| | ||||| ||| ||| || | ||| || || ||| |||||
Sbjct 40882 CCGCGGTGTTCTCAAGGTTTTCCTGGAGAACGTGATTCGTGACGCCGTCACCTACACCGA 40941
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||| || || | |||||||| ||| ||||||| | || || || |||| | || ||
Sbjct 40942 GCATGCAAAGAGAAAGACTGTGACCGCCATGGACGTGGTGTACGCCCTGAAGAGACAGGG 41001
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||| | | || || || ||| |||||
Sbjct 41002 CCGCACTCTGTACGGCTTCGGAGGTTAA 41029
Score = 141 bits (156), Expect = 1e-29
Identities = 159/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| |||||||| || | ||| || ||||||||||| || || ||||| || |||||
Sbjct 28516 CGCCAAGCGTCACCGTAAGGTTCTCCGTGATAACATCCAGGGTATTACCAAACCCGCTAT 28575
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||||||||| || || || || |||||| |||| || || |||| || ||||
Sbjct 28576 CCGCCGTCTGGCTCGCCGCGGCGGTGTGAAGCGTATCTCCGGTCTGATCTACGAGGAGAC 28635
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | |||| | ||| | ||||| ||| ||| |||| ||| || || ||| |||||
Sbjct 28636 CCGCGGTGTTCTCAAGGTTTTCCTGGAGAACGTGATCCGTGACGCCGTCACCTACACCGA 28695
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGA 16644
|||||| || | ||||| || || |||||||
Sbjct 28696 GCACGCCAAGAGGAAGACCGTGACTGCCATGGA 28728
>seq24033
Length=2185
Score = 159 bits (176), Expect = 5e-35
Identities = 196/268 (73%), Gaps = 0/268 (0%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| |||||||| || | | ||| || || |||||||| || ||||| ||||| || ||
Sbjct 1106 CGCCAAGCGTCACCGTAAAGTTCTCCGTGACAACATCCAGGGCATCACTAAGCCCGCCAT 1165
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
|||||| ||||| ||||| || ||||| |||||| |||| || || ||||||| ||||
Sbjct 1166 CCGTCGCCTGGCGCGTCGCGGCGGAGTGAAGCGTATCTCCGGCCTGATCTATGAGGAGAC 1225
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
||| | || | ||| | ||||| ||| ||| |||| || || || || |||||
Sbjct 1226 TCGCGGGGTGCTCAAGGTATTCCTGGAGAACGTGATCCGCGACGCCGTCACTTACACCGA 1285
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | || ||||| || ||||||| | || || ||| |||| | || ||
Sbjct 1286 GCACGCCAAGAGAAAAACTGTGACAGCCATGGACGTGGTATACGCACTGAAGAGACAGGG 1345
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||| | | || ||||||||| |||||
Sbjct 1346 CCGCACTCTCTACGGTTTTGGAGGTTAA 1373
>seq17943
Length=43558
Score = 145 bits (160), Expect = 1e-30
Identities = 193/268 (72%), Gaps = 0/268 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| |||||||| || | | ||| || || |||||||| || ||||| || || || ||
Sbjct 327 CGCCAAGCGTCACCGTAAAGTTCTCCGTGACAACATCCAGGGCATCACTAAACCCGCCAT 268
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||||||||| ||||| || || |||||| |||| || || |||| || ||||
Sbjct 267 CCGCCGTCTGGCTCGCCGTGGCGGTGTGAAGCGTATCTCAGGTCTGATCTACGAGGAGAC 208
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | ||| | ||| | ||||| ||| ||| |||| ||| || || ||| |||||
Sbjct 207 CCGCGGTGTGCTCAAGGTTTTCCTGGAGAACGTGATCCGTGACGCCGTCACCTACACCGA 148
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| || || ||||||| | || || || | || | || ||
Sbjct 147 GCACGCCAAGAGGAAGACCGTGACTGCCATGGACGTGGTGTACGCGCTCAAGAGACAGGG 88
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
|| | | |||||||| ||| |||||
Sbjct 87 ACGCACTCTGTATGGTTTCGGAGGTTAA 60
>seq23184
Length=199094
Score = 138 bits (152), Expect = 2e-28
Identities = 193/271 (71%), Gaps = 0/271 (0%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|||||||||||| || | | ||| || ||||||||||| || |||||||| || || ||
Sbjct 62371 CGCTAAGCGTCACCGTAAAGTTCTGCGTGATAACATCCAGGGCATCACCAAACCCGCCAT 62430
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| | ||||| || || || || || |||||| | || || || ||||||| ||||
Sbjct 62431 CCGCAGACTGGCGCGCCGCGGCGGTGTGAAGCGTATTTCCGGTCTGATCTATGAGGAGAC 62490
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | ||| | || | ||||| ||| ||| |||| || || || ||| |||||
Sbjct 62491 CCGCGGTGTGCTCAAAGTTTTCCTGGAGAACGTGATCCGCGACGCAGTCACCTACACCGA 62550
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| || ||| ||||||| | || || || |||| | || ||
Sbjct 62551 GCACGCCAAGAGGAAGACCGTGACCGCCATGGACGTGGTGTACGCGCTGAAGAGACAGGG 62610
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCT 16702
||| | | || || || ||| ||||| ||
Sbjct 62611 CCGCACTCTCTACGGCTTCGGAGGTTAAGCT 62641
>seq19539
Length=19330
Score = 136 bits (150), Expect = 6e-28
Identities = 191/268 (71%), Gaps = 0/268 (0%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| |||||||| || | | ||| || || |||||||| || |||||||| || || ||
Sbjct 15974 CGCCAAGCGTCACCGTAAAGTTCTCCGTGACAACATCCAGGGCATCACCAAACCCGCCAT 16033
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| |||||||||||||| || || || |||||| |||| || || |||| || ||||
Sbjct 16034 CCGCCGTCTGGCTCGTCGCGGCGGTGTGAAGCGTATCTCCGGTCTGATCTACGAGGAGAC 16093
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | || | ||| | || || ||| ||| |||| ||| || | || |||||
Sbjct 16094 CCGCGGAGTGCTCAAGGTGTTTCTGGAGAACGTGATCCGTGACGCAGTGACGTACACCGA 16153
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| || ||| ||||||| | || || || |||| | || ||
Sbjct 16154 GCACGCCAAGAGGAAGACCGTGACCGCCATGGACGTGGTGTACGCCCTGAAGAGACAGGG 16213
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||| | | || || || ||| |||||
Sbjct 16214 CCGCACTCTGTACGGCTTCGGAGGTTAA 16241
>seq17191
Length=53944
Score = 136 bits (150), Expect = 6e-28
Identities = 191/268 (71%), Gaps = 0/268 (0%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| |||||||| || | | ||| || || |||||||| || |||||||| || || ||
Sbjct 2534 CGCCAAGCGTCACCGTAAAGTTCTCCGTGACAACATCCAGGGCATCACCAAACCCGCCAT 2593
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| |||||||||||||| || || || |||||| |||| || || |||| || ||||
Sbjct 2594 CCGCCGTCTGGCTCGTCGCGGCGGTGTGAAGCGTATCTCCGGTCTGATCTACGAGGAGAC 2653
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | || | ||| | || || ||| ||| |||| ||| || | || |||||
Sbjct 2654 CCGCGGAGTGCTCAAGGTGTTTCTGGAGAACGTGATCCGTGACGCAGTGACGTACACCGA 2713
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| || ||| ||||||| | || || || |||| | || ||
Sbjct 2714 GCACGCCAAGAGGAAGACCGTGACCGCCATGGACGTGGTGTACGCCCTGAAGAGACAGGG 2773
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||| | | || || || ||| |||||
Sbjct 2774 CCGCACTCTGTACGGCTTCGGAGGTTAA 2801
Score = 125 bits (138), Expect = 1e-24
Identities = 191/270 (71%), Gaps = 4/270 (1%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAA--GCCAGCT 16489
||| |||||||| || | | ||| || || |||||||| || |||||||| ||||
Sbjct 7531 CGCCAAGCGTCACCGTAAAGTTCTCCGTGACAACATCCAGGGCATCACCAAACGCCAC-- 7474
Query 16490 ATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAG 16549
||||| |||||||||||||| || || || |||||| |||| || || |||| || |||
Sbjct 7473 ATCCGCCGTCTGGCTCGTCGCGGCGGTGTGAAGCGTATCTCCGGTCTGATCTACGAGGAG 7414
Query 16550 ATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACC 16609
| || | || | ||| | || || ||| ||| |||| ||| || | || |||
Sbjct 7413 ACCCGCGGAGTGCTCAAGGTGTTTCTGGAGAACGTGATCCGTGACGCAGTGACGTACACC 7354
Query 16610 GAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAA 16669
|||||||| || | ||||| || ||| ||||||| | || || || |||| | ||
Sbjct 7353 GAGCACGCCAAGAGGAAGACCGTGACCGCCATGGACGTGGTGTACGCCCTGAAGAGACAG 7294
Query 16670 GGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||||| | | || || || ||| |||||
Sbjct 7293 GGCCGCACTCTGTACGGCTTCGGAGGTTAA 7264
>seq21518
Length=5902
Score = 132 bits (146), Expect = 8e-27
Identities = 190/268 (71%), Gaps = 0/268 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| |||||||| || | | ||| || || |||||||| || |||||||| || || ||
Sbjct 3299 CGCCAAGCGTCACCGTAAAGTTCTCCGTGACAACATCCAGGGCATCACCAAACCCGCCAT 3240
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| |||||||||||||| || || || |||||| |||| || || |||| || ||||
Sbjct 3239 CCGCCGTCTGGCTCGTCGCGGCGGTGTGAAGCGTATCTCCGGTCTGATCTACGAGGAGAC 3180
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | || | ||| | || || ||| || |||| ||| || | || |||||
Sbjct 3179 CCGCGGAGTGCTCAAGGTGTTTCTGGAGAATGTGATCCGTGACGCAGTGACGTACACCGA 3120
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| || ||| ||||||| | || || || |||| | || ||
Sbjct 3119 GCACGCCAAGAGGAAGACCGTGACCGCCATGGACGTGGTGTACGCCCTGAAGAGACAGGG 3060
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||| | | || || || ||| |||||
Sbjct 3059 CCGCACTCTGTACGGCTTCGGAGGTTAA 3032
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79051373159580
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