Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_006820.1
Length=196280
Score E
Sequences producing significant alignments: (Bits) Value
seq21827 621 5e-173
seq25415 578 5e-160
>seq21827
Length=6214
Score = 621 bits (688), Expect = 5e-173
Identities = 717/958 (75%), Gaps = 8/958 (1%)
Strand=Plus/Plus
Query 135374 TTCTGCGAGTGGGTTACCAGCACCGACAACCGCCTCTATGTGGGTTGGTTTGGAACGCTG 135433
||||| | ||| | |||||||| || ||||| || || | || |||||||| ||
Sbjct 5031 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 5090
Query 135434 ATGATTCCTACTCTTCTCG-CAGCTGCTATCTGC-TTTATTGTTGCTTTCATCGCTGCAC 135491
||||| ||||| ||| | | | || || |||| |||||| | |||||||| ||||| |
Sbjct 5091 ATGATCCCTAC-CTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCCC 5148
Query 135492 CTCCCGTCGATATTGACGGCATCCGCGAACCTGTTGCTGGTTCTCTAATGTACGGAAATA 135551
|||| || |||||||| || || || ||||||||| |||| |||||| | || ||||| |
Sbjct 5149 CTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACA 5208
Query 135552 ACATCATCTCTGGTGCTGTTATCCCTTCTA--GCAACGCCATCGGCCTTCACTTCTATCC 135609
| || || |||||||| |||| ||| || ||| || || || | || || || ||
Sbjct 5209 ATATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCG--ATAGGTTTGCATTTTTACCC 5266
Query 135610 CATCTGGGAAGCTGCTTCTCTTGATGAGTGGCTATATAATGGTGGTCCTTATCAACTAGT 135669
|| |||||||| ||||| ||||||| ||| |||| ||||||||||||||| | ||| |
Sbjct 5267 GATATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAAT 5326
Query 135670 GGTCTTCCACTTCCTTATCGGTGTCTTCTCTTACATGGGTCGCGAGTGGGAACTCTCTTA 135729
|| | ||||| | | ||||| | ||| |||||||| ||||||||||| ||
Sbjct 5327 TGTTCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTT 5386
Query 135730 CCGACTGGGTATGCGCCCTTGGATTTGTGTCGCTTACTCAGCCCCTGTTGCCGCTGCTAC 135789
||| ||||||||||||||||||||| ||| || || ||||| |||||||| ||||||||
Sbjct 5387 CCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTAC 5446
Query 135790 TGCTGTTTTCCTGGTCTACCCCTTTGGACAAGGTTCTTTCAGTGATGGTATGCCGCTTGG 135849
|||||||||| || |||| || |||| ||||| || ||| |||||||| || ||
Sbjct 5447 TGCTGTTTTCTTGATCTATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGG 5506
Query 135850 CATTTCTGGAACTTTTAACTACATGCTTGTTTTCCAGGCAGAACACAACATTCTCATGCA 135909
|| ||||| ||||| |||| |||| |||| ||||| || || |||||||| || |||||
Sbjct 5507 AATCTCTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCA 5566
Query 135910 TCCTTTCCACATGTTGGGAGTTGCTGGGGTCTTCGGTGGTTCTCTGTTCTCTGCTATGCA 135969
|| || |||||||| || || ||||| || ||||| || || || ||| |||||||||
Sbjct 5567 CCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCA 5626
Query 135970 TGGATCTCTTGTCACCTCTAGTCTTGTACGTGAGACGACTGAGGTAGAATCCCAGAACTA 136029
||| || | || || |||||| | | | || || || || ||||| || |
Sbjct 5627 TGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGA 5686
Query 136030 TGGTTACAAGTTCGGTCAAGAAGAAGAGACTTACAACATTGTTGCTGCTCATGGTTACTT 136089
||||||| ||||||||||| ||||| || ||||| || || |||||||||||||| ||
Sbjct 5687 AGGTTACAGATTCGGTCAAGAGGAAGAAACCTACAATATCGTAGCTGCTCATGGTTATTT 5746
Query 136090 CGGTCGTCTGATCTTCCAATATGCGTCGTTCAACAACTCTCGTTCGCTACACTTTTTCCT 136149
|| || |||||||||||||||| ||||||||||||||||| ||||||| |||||
Sbjct 5747 TGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCT 5806
Query 136150 TGCTGCTTGGCCTGTTGTCGGTATCTGGTTTGCTGCCCTGGGCGTATCTACGATGGCGTT 136209
|||||||||||||| || ||||| ||||| |||| | || | || ||||| ||
Sbjct 5807 AGCTGCTTGGCCTGTAGTAGGTATTTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTT 5866
Query 136210 CAACCTCAATGGATTCAACTTCAACCAGTCCATTGTATCTTCTGAAGGTCGTGTACTCAA 136269
||| | ||||| ||||| |||||||| || | || | | ||||||||||| | ||
Sbjct 5867 TAACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAA 5926
Query 136270 CACCTGGGCAGATGTGCTGAATCGTGCTGGTCTGGGTATGGAGGTGATGCACGAGCGT 136327
|||||||| ||| | | || |||||| |||||||||| || ||||| || |||
Sbjct 5927 TACCTGGGCTGATATTATCAACCGTGCTAACTTGGGTATGGAAGTTATGCATGAACGT 5984
>seq25415
Length=1491
Score = 578 bits (640), Expect = 5e-160
Identities = 737/1009 (73%), Gaps = 12/1009 (1%)
Strand=Plus/Plus
Query 137875 TGGATGACTGGATTAAACGAGATCGCTTTGTATTTGTGGGTTGGTCTGGACTACTACTTT 137934
||||||||||| | | || || || || ||||| |||||||| || ||| | || |
Sbjct 376 TGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGTCTATTGCTCT 435
Query 137935 TTCCCACTGCTTATTTGGCCCTTGGTGGCTGGCTTACTGGCACAACGTTTGTTACAAGCT 137994
|||| ||| ||||| ||| | || || ||| |||| || ||||| ||||| || |
Sbjct 436 TTCCTTGTGCCTATTTCGCCGTAGGGGGTTGGTTTACAGGTACAACCTTTGTAACTTCAT 495
Query 137995 GGTACACCCACGGGTTGGCGTCTAGTTATCTTGAAGGCGCTAATTTCCTCACAGCAGCTG 138054
|||| ||||| || || || | ||| | |||||| || ||| | || || || |
Sbjct 496 GGTATACCCATGGATTAGCAAGTTCCTATTTGGAAGGCTGCAACTTCTTAACCGCCGCAG 555
Query 138055 TTTCGACTCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTC 138114
|||| ||||||||| || | | | || ||| | | |||| ||||| ||||| | |
Sbjct 556 TTTCTACTCCTGCTAATAGTTTAGCACACTCTTTGTTGTTACTATGGGGCCCTGAAGCAC 615
Query 138115 AAGGAGATATCGTCCGCTGGTTCCAACTTGGGGGACTCTGGACTTTTGTGGCGCTCCACG 138174
|||||||| | || |||| ||| | || || || ||||||||||| || || ||||
Sbjct 616 AAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTTGTTGCTCTTCACG 675
Query 138175 GGGCCTTTAGTCTGATTGGATTCATGCTTCGCCAGTTTGAGATCTCTCG-TCTGGTAGGC 138233
| || || | || || || |||||| | || || ||||| | |||| |||| | |
Sbjct 676 GCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTT---C 732
Query 138234 A--TCCGTCCCTACAACGCAATCGCATTCTCTGGTCCCATCGCTGTGTTCGTCAGCGTGT 138291
| | || || || || |||||||||||||| ||||| || || || || || || |
Sbjct 733 AATTACGACCTTATAATGCAATCGCATTCTCCGGTCCAATTGCGGTTTTTGTTTCTGTAT 792
Query 138292 TCCTGATGTATCCTTTGGGTCAATCCAGTTGGTTCTTTGCTCCCTCCTTTGGTGTGGCAG 138351
||||||| ||||| | ||||| || ||||||||||||| || |||||||| || |
Sbjct 793 TCCTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCAAGTTTTGGTGTAGCGG 852
Query 138352 CAATCTTCCGAT---TCCTGTTGTTCCTTCAGGGTTTCCATAACTGGACCCTCAACCCCT 138408
| || || |||| |||| || |||| ||||||| ||||| ||||| | ||||| |
Sbjct 853 CTATATTTCGATTCATCCTCTTTTTCC--AAGGGTTT-CATAATTGGACATTGAACCCAT 909
Query 138409 TTCATATGATGGGCGTAGCAGGTATTCTTGGTGGTGCTCTGCTCTGTGCTATTCATGGTG 138468
||||||||||||| || || || | | || | ||||||||| || |||||||||||||
Sbjct 910 TTCATATGATGGGAGTTGCTGGGGTATTGGGCGCTGCTCTGCTATGCGCTATTCATGGTG 969
Query 138469 CTACAGTAGAAAATACTTTGTATGAAGATGGCGAACAATCAAATACTTTTAAAGCATTTG 138528
|||| |||||||||||||| | ||||||||| || ||||||| || || |||
Sbjct 970 CTACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTA 1029
Query 138529 AACCTACTCAAGAAGAAGAAACCTATTCAATGGTTACTGCTAACCGTTACTGGTCGCAAA 138588
| || ||||||| |||||||| ||||||||||| || |||||||| | ||||| ||||
Sbjct 1030 ACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAA 1089
Query 138589 TCTTTGGAATTGCTTTTAGTAATAAGCGTTGGCTTCACTTCTTTATGCTCTTTGTTCCCG 138648
||||||| |||||||| ||||| |||||| | || ||||||||| | ||||| || |
Sbjct 1090 TCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAG 1149
Query 138649 TCATGGGTCTCTGGACTAGTAGTATTGGTATTATTGGTCTTGCTCTTAACCTACGAGCGT 138708
| | ||| | |||| ||| | |||| | | ||||| || || || ||||| || |
Sbjct 1150 TAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCCCTGAATCTACGTGCCT 1209
Query 138709 ATGATTTCGTATCGCAAGAAATTCGTGCAGCAGAAGATCCTGAATTCGAGACCTTCTACA 138768
|||| ||||| || || ||||| |||||||| |||||||| ||||| ||||| |||||||
Sbjct 1210 ATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCGGAATTTGAGACTTTCTACA 1269
Query 138769 CCAAGAACATTCTTCTGAATGAAGGTCTGCGTGCCTGGATGGCTCCTGTGGATCAACCTC 138828
|||| || ||||| | || |||||| | ||||| |||||||| || ||||| ||||
Sbjct 1270 CCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTC 1329
Query 138829 ACGAAAACTTTGTTTTTCCTGAAGAAGTATTGCCAAGAGGCAACGCTCT 138877
| |||||| || | || ||||| || || | || | || ||||||||
Sbjct 1330 ATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 1378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627763439424000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |