Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_006884.2
Length=178249
Score E
Sequences producing significant alignments: (Bits) Value
seq21827 493 1e-134
seq25415 376 3e-99
>seq21827
Length=6214
Score = 493 bits (546), Expect = 1e-134
Identities = 705/988 (71%), Gaps = 10/988 (1%)
Strand=Plus/Plus
Query 170666 TTTTGTGAGTGGGTAACATCCACTGACAATCGCATCTACGTTGGTTGGTTTGGTGTCTTA 170725
|| ||| | ||| |||| |||||| || || | ||| |||| ||||||||||| ||
Sbjct 5031 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 5090
Query 170726 ATGATCCCATGTCTTCTA-ACTGCTGCTGCTTGTTTCATTGTAGCATTCATCGCTGCTCC 170784
|||||||| | ||| | || || || || || ||| | || ||||| ||||| ||
Sbjct 5091 ATGATCCC-TACCTTATTGACCGCAACTTCTGTATTTATTATCGCTTTCATTGCTGCCCC 5149
Query 170785 TCCAGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAA 170844
||| || ||||| || || || | ||||| ||| | || ||| | | ||||| |||||
Sbjct 5150 TCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAA 5209
Query 170845 CATCATCTCTGGTGCTGTAGTTCCATCTTCAAACGCAATAGGATTACACTTCTATCCCAT 170904
|| || |||||||| | |||| |||| || ||||| || || || || || ||
Sbjct 5210 TATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCGATAGGTTTGCATTTTTACCCGAT 5269
Query 170905 CTGGGAAGCAGCCACTATGGACGAGTGGTTGTACAACGGAGGTCCTTACCAGTTAGTTAT 170964
|||||||| || | | || || ||||| ||||| || |||||||| || || || |
Sbjct 5270 ATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGT 5329
Query 170965 TTTCCACTTCCTTATTGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACAG 171024
| | ||||| | |||| | || || |||||| | |||||||||| | | |
Sbjct 5330 TCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCG 5389
Query 171025 ACTAGGAATGAGACCTTGGATATGTGTAGCATACTCAGCACCTGTATCTGCAGCATTTGC 171084
|| || ||| | |||||||| ||| ||||| ||||| ||||| | || || |||
Sbjct 5390 TCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGC 5449
Query 171085 AGTATTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTAT 171144
|| ||| | | |||||| | ||||| || || ||||| |||||||| ||||| ||
Sbjct 5450 TGTTTTCTTGATCTATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAAT 5509
Query 171145 CTCAGGTACGTTCAACTTCATGTTCGTGTTCCAAGCAGAACACAACATACTAATGCACCC 171204
||| ||||| |||||||||||| | || |||||||| || |||||||| || ||||||||
Sbjct 5510 CTCTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCC 5569
Query 171205 CTTCCATATGGCAGGTGTAGCAGGTATGTTCGGTGGTAGTCTCTTCAGTGCAATGCACGG 171264
|| || ||| ||| ||||| ||| | ||||| || || |||||||| ||||| ||
Sbjct 5570 ATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG 5629
Query 171265 TTCTCTAGTGACATCTTCTCTAATCAGAGAGACAACTGAGAACGAGAGTCAAAACTACGG 171324
||| | || || ||| | | ||||| || || || || || || | || | ||
Sbjct 5630 TTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGG 5689
Query 171325 CTATAAGTTCGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGGATACTTCGG 171384
|| | ||||| ||||| |||||||| || || || || ||||||||||| || || ||
Sbjct 5690 TTACAGATTCGGTCAAGAGGAAGAAACCTACAATATCGTAGCTGCTCATGGTTATTTTGG 5749
Query 171385 TAGATTAATCTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACACTTCTTCCTCGC 171444
|||| |||||||| ||||| ||||||||||||||||| |||||||||||||| ||
Sbjct 5750 CCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCTAGC 5809
Query 171445 TGTATTCCCTGTAGTCTGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAA 171504
|| | |||||||| || | ||||| || || | ||||| | || ||||| || ||
Sbjct 5810 TGCTTGGCCTGTAGTAGGTATTTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTTAA 5869
Query 171505 CCTTAACGGATTCAACTTCAACCAATCAGTTGTAGATG--CAAA--CGGAAAGATTGTAC 171560
| | || || ||||| ||||||||||| || || ||| ||| || | | |||
Sbjct 5870 CTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATAC 5929
Query 171561 CAACATGGGGAGATGTTCTTAACAGAGCAAACCTTGGAATGGAAGTTATGCATGAAAGAA 171620
| |||| ||| || | ||| | || ||| | || |||||||||||||||||| | |
Sbjct 5930 C----TGGGCTGATATTATCAACCGTGCTAACTTGGGTATGGAAGTTATGCATGAACGTA 5985
Query 171621 ATGCACACAACTTCCCACTAGACCTAGC 171648
| || || |||||||| ||||| |||||
Sbjct 5986 ACGCTCATAACTTCCCTCTAGATCTAGC 6013
>seq25415
Length=1491
Score = 376 bits (416), Expect = 3e-99
Identities = 706/1038 (68%), Gaps = 21/1038 (2%)
Strand=Plus/Plus
Query 171795 TTTGACGTTCTTGATGATTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGT 171854
||||| || | ||||| |||||| ||| || |||||||| || | || ||||| |||
Sbjct 366 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGT 425
Query 171855 CTTTTACTTTTACCTTGTGCTTACCTAGCAATCGGAGGTTGGTTCGTAGGAACTACTTTC 171914
|| || || || |||||||| || | || | || |||||||| ||| || || ||
Sbjct 426 CTATTGCTCTTTCCTTGTGCCTATTTCGCCGTAGGGGGTTGGTTTACAGGTACAACCTTT 485
Query 171915 GTGACCTCATGGTACACACATGGTATTGCATCCTCATATCTTGAGGGAGCAAACTTTTTA 171974
|| || |||||||| || ||||| | ||| || ||| | || || ||||| |||
Sbjct 486 GTAACTTCATGGTATACCCATGGATTAGCAAGTTCCTATTTGGAAGGCTGCAACTTCTTA 545
Query 171975 ACTGCAGCAGTATCAACACCTGGTGATGCTATGGGTCATAGTCTATTGTTCCTATGGGGA 172034
|| || ||||| || || |||| | || | | | || | | ||||| ||||||||
Sbjct 546 ACCGCCGCAGTTTCTACTCCTGCTAATAGTTTAGCACACTCTTTGTTGTTACTATGGGGC 605
Query 172035 CCTGAGGCACAAGGAGATCTTGTACGATGGTTTCAATTAGGTGGACTATGGAACTTTGTA 172094
||||| |||||||||||| || || |||| ||||||||| || || |||| |||||
Sbjct 606 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTTGTT 665
Query 172095 GCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTTAGACAGTTTGAGATTGCAGGA 172154
|| | || || | || ||||| |||||||||||| | | || ||||| |||| ||
Sbjct 666 GCTCTTCACGGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGA 725
Query 172155 CTTGTTGGGATACGTCCTTACAACGCACTAGCATTCTCAGCAGTTATTGCAGTATTCACG 172214
|||| |||| ||||| || ||| | |||||||| | ||||| || ||
Sbjct 726 TCTGTTCAATTACGACCTTATAATGCAATCGCATTCTCCGGTCCAATTGCGGTTTTTGTT 785
Query 172215 AGCATCTTTCTAATATATCCATTAGGTCAGCATAGTTGGTTCTTCGCACCTTCATTTGGT 172274
| || || || ||||| |||||||| | |||||||||| || || ||||||
Sbjct 786 TCTGTATTCCTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCAAGTTTTGGT 845
Query 172275 GTCGCAGCAATCTTTCGTTATATTTTATTCATACAGGGTTTCCACAATATAACTCTTAAT 172334
|| || || || ||||| | || | || | || || || || ||| || | ||
Sbjct 846 GTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAAC 905
Query 172335 CCATTTCATATGATGGGTGTAGCAGGTATACTTGGTGGAGCATTACTATGTGCCATACAT 172394
||||||||||||||||| || || || || | || | || | ||||| || || |||
Sbjct 906 CCATTTCATATGATGGGAGTTGCTGGGGTATTGGGCGCTGCTCTGCTATGCGCTATTCAT 965
Query 172395 GGTGCAACAGTACAGAACACATTGTATGAAGACACATCACAATACACTGAAGGTAAGATT 172454
||||| || ||| | || || || | |||||| || | | | |
Sbjct 966 GGTGCTACCGTAGAAAATACTTTATTTGAAGA---------------TG--GTGATGGTG 1008
Query 172455 CAATCTACAACTTTCAGAGCATTCGATCCTACACAGGAAGAAGAAACTTATAGTATGATT 172514
||| |||| ||| | || || | || || || | |||||||||||| ||| |
Sbjct 1009 CAA-ATACA---TTCCGGGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTC 1064
Query 172515 ACTGCTAACAGATTCTGGTCACAGATATTTGGTATAGCATTTTCAAACAAAAGATTCTTA 172574
|| |||||| | || ||||| || || ||||| | || ||||| || ||| | | |||
Sbjct 1065 ACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTA 1124
Query 172575 CACTTCCTTATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCTATAGGTATCGTA 172634
|| ||| ||||||| || ||||| || | ||| | |||| || | || | ||
Sbjct 1125 CATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTC 1184
Query 172635 GGTCTTGCACTTAACCTCAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCAGAA 172694
||||| || || || || | || || ||||| || ||||| || || | ||||| |||
Sbjct 1185 GGTCTAGCCCTGAATCTACGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAA 1244
Query 172695 GACCCAGAGTTTGAAACCTTCTACACTAAGAACATTCTTCTTAATGAAGGTATGAGAGCA 172754
|| || || ||||| || |||||||| || || ||||| | || |||||||| | ||
Sbjct 1245 GATCCGGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCT 1304
Query 172755 TGGATGTCATCTGTCGATCAACCCCATGAGAACTTTGTGTTCCCAGAAGAAGTCTTGCCA 172814
|||||| | || ||||| || ||||| ||| || | ||||| || || || | ||
Sbjct 1305 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCC 1364
Query 172815 CGAGGCAACGCACTATAA 172832
|| || ||||| || |||
Sbjct 1365 CGTGGAAACGCTCTTTAA 1382
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570083034938400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |