Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq18889 187 6e-42 >seq18889 Length=1054283 Score = 187 bits (206), Expect = 6e-42 Identities = 771/1204 (64%), Gaps = 34/1204 (3%) Strand=Plus/Minus Query 363076 ATCAAGGTTGTTCAGGGTCTATATGATGGTGTTACAACTGTTCAGCTAGACAATCTTGCC 363135 || ||||| | || ||||| || || || || ||||| |||| |||| ||||| Sbjct 965842 ATGAAGGTGATCCAAGGTCTGTACAGCGGAGTGACCACTGTGGAGCTGGACACACTTGCT 965783 Query 363136 GTAGAAACTGCAACTTATCTGACCATGACGCATCCTGATTACTCCAAACTGGCTGCTCGC 363195 | ||| | ||| | ||||||| || ||| || ||||| ||| |||||||| || Sbjct 965782 GCAGAGATTGCTGCCACACTGACCACGAAGCACCCAGATTATGCCATCCTGGCTGCACGA 965723 Query 363196 ATTGCAGTTTCGTCTCTTCATAAAATGACATCAAATAAGTTTTCCAGTG---TCATGGAT 363252 ||||| || || ||| |||||| ||| || ||| | | ||||| ||||||| Sbjct 965722 ATTGCTGTGTCAAATCTCCATAAAGAGACC---AAGAAGGTGTTCAGTGACGTCATGGAG 965666 Query 363253 AGTCTGTATAACTATGTCAATAC---AAAGACCGGTAAGTGG---TCACCACTCATTGCC 363306 ||||| ||||||||||| | ||| |||| | || || | || || Sbjct 965665 GATCTGTTCCACTATGTCAATCCTTTAAA------TAAGCGCCACTCCCCCATGATCTCC 965612 Query 363307 GATGACATTATTGAATGTATCCGTTCTAATGCGGAAGTTTTCGATGACGTTATCAATTAT 363366 | |||| | || | ||| | | || || || | | ||| | |||| Sbjct 965611 CAAGACACCCTAGATCTTGTCCTTGCAAACAAAGACCGCCTCAACTCTGCTATAATTTAT 965552 Query 363367 GAGAAGGATCTCGAGTATGATATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCT 363426 || | |||| | || || | || || | ||| ||| | ||| || ||| | Sbjct 965551 GATAGGGATTTTTCTTACAATTTCTTTGGCTTTAAAACGCTAGAGCGCTCTTACTTGCTG 965492 Query 363427 CGTATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGT 363486 ||||||||| | | | ||| ||||| ||||| ||| | ||| | || ||| | || Sbjct 965491 AAAATCAATGGTAAAGTGGCTGAGCGCCCACAGCACATGCTCATGAGAGTAGCTGTCGGA 965432 Query 363487 ATCCATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTC-GTGT 363545 ||||| | | ||| | ||||| || ||||| || || || || || || ||| Sbjct 965431 ATCCACAACTCTGATATAGATGCAGCCATTGAGACCTACAACCTGCTGTCTGAGAAGTGG 965372 Query 363546 ATTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTC 363605 ||||| || ||| | || || ||| ||| || || ||| | || ||| | || Sbjct 965371 -TTCACTCATGCCTCTCCCACTCTGTTCAACGCAGGCACTAACAGACCCCAGCTCTCCAG 965313 Query 363606 TTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665 ||||| || || |||||||| || ||| || || || | ||||||||| || | Sbjct 965312 CTGCTTCCTGCTGGCCATGAAGGATGACAGCATTGATGGCATTTATGACACACTGAAACA 965253 Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC 363725 ||||||||||| || || |||||| || ||||||||| | | | | || | | Sbjct 965252 ATGTGCTCTTATCTCTAAATCTGCAGGAGGGATTGGTGTAGCAGTTAGCTGTATTAGATC 965193 Query 363726 A-CAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTC 363784 | ||| | ||||||||| || ||| || |||| ||||| || || || ||||| Sbjct 965192 AACAGGA-AGTTACATTGCTGGAACAAATGGTAACTCAAATGGTCTTGTGCCGATGCTGA 965134 Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGT 363844 | |||| |||| ||||| | || || ||||| ||||| || || || || | Sbjct 965133 GAGTGTACAACAACACTGCACGCTATGTGGACCAAGGTGGCAATAAACGACCGGGTGCCT 965074 Query 363845 TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAA 363904 |||| || || | ||||| || ||| | ||||| ||||||||||| ||| | Sbjct 965073 TTGCCATTTACTTGGAGCCATGGCACTTTGATGTGTTTGACTTTCTTGAGCTGAAGAAGA 965014 Query 363905 ACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACC 363964 |||| || |||||||| | | || || || || |||||||| || ||| | |||||| Sbjct 965013 ACACTGGTAAAGAGGAGCAGAGGGCGCGAGACCTCTTCTATGCCCTATGGATCCCTGACC 964954 Query 363965 ATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTC 364024 || |||||| | ||||| || | ||||| | | || || || || | Sbjct 964953 TGTTCATGAAGAGAGTGGAAAACAACCAGGACTGGTCTTTGATGTGTCCCAGTGAGTGCC 964894 Query 364025 CAGGTCTTTCCGA-TGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCG 364083 | || | || ||| ||||| || || | || || ||| | |||||| | Sbjct 964893 CTGGGTTGGATGAGTGT-TGGGGGGAGGAGTTTGAGAAGCTGTACACACGATATGAACAG 964835 Query 364084 GAGGGAA-----AGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGG 364138 ||||| | | || || | ||| || ||| || | |||| ||||||||| | Sbjct 964834 GAGGGTAGAGTGAAGCGGGT-GGTCAA----GGCTCAGCAGGTGTGGTATGCCATCATAG 964780 Query 364139 ATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGT 364198 | || |||| || || |||||||| || ||||||||||||||| | || ||| | ||| Sbjct 964779 AGTCTCAGACAGAAACGGGAACACCTTACATGTTGTACAAAGATGCCTGTAACAGGAAGA 964720 Query 364199 CCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAAT 364258 ||||||||| | | || || || | || ||| | || || |||||| | || | Sbjct 964719 GTAACCAGCAGAATTTGGGCACCATCAAATGCAGTAACTTGTGCACTGAGATTGTGGAGT 964660 Query 364259 ACAC 364262 | || Sbjct 964659 ATAC 964656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302918418378920