Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq18889 187 6e-42
>seq18889
Length=1054283
Score = 187 bits (206), Expect = 6e-42
Identities = 771/1204 (64%), Gaps = 34/1204 (3%)
Strand=Plus/Minus
Query 363076 ATCAAGGTTGTTCAGGGTCTATATGATGGTGTTACAACTGTTCAGCTAGACAATCTTGCC 363135
|| ||||| | || ||||| || || || || ||||| |||| |||| |||||
Sbjct 965842 ATGAAGGTGATCCAAGGTCTGTACAGCGGAGTGACCACTGTGGAGCTGGACACACTTGCT 965783
Query 363136 GTAGAAACTGCAACTTATCTGACCATGACGCATCCTGATTACTCCAAACTGGCTGCTCGC 363195
| ||| | ||| | ||||||| || ||| || ||||| ||| |||||||| ||
Sbjct 965782 GCAGAGATTGCTGCCACACTGACCACGAAGCACCCAGATTATGCCATCCTGGCTGCACGA 965723
Query 363196 ATTGCAGTTTCGTCTCTTCATAAAATGACATCAAATAAGTTTTCCAGTG---TCATGGAT 363252
||||| || || ||| |||||| ||| || ||| | | ||||| |||||||
Sbjct 965722 ATTGCTGTGTCAAATCTCCATAAAGAGACC---AAGAAGGTGTTCAGTGACGTCATGGAG 965666
Query 363253 AGTCTGTATAACTATGTCAATAC---AAAGACCGGTAAGTGG---TCACCACTCATTGCC 363306
||||| ||||||||||| | ||| |||| | || || | || ||
Sbjct 965665 GATCTGTTCCACTATGTCAATCCTTTAAA------TAAGCGCCACTCCCCCATGATCTCC 965612
Query 363307 GATGACATTATTGAATGTATCCGTTCTAATGCGGAAGTTTTCGATGACGTTATCAATTAT 363366
| |||| | || | ||| | | || || || | | ||| | ||||
Sbjct 965611 CAAGACACCCTAGATCTTGTCCTTGCAAACAAAGACCGCCTCAACTCTGCTATAATTTAT 965552
Query 363367 GAGAAGGATCTCGAGTATGATATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCT 363426
|| | |||| | || || | || || | ||| ||| | ||| || ||| |
Sbjct 965551 GATAGGGATTTTTCTTACAATTTCTTTGGCTTTAAAACGCTAGAGCGCTCTTACTTGCTG 965492
Query 363427 CGTATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGT 363486
||||||||| | | | ||| ||||| ||||| ||| | ||| | || ||| | ||
Sbjct 965491 AAAATCAATGGTAAAGTGGCTGAGCGCCCACAGCACATGCTCATGAGAGTAGCTGTCGGA 965432
Query 363487 ATCCATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTC-GTGT 363545
||||| | | ||| | ||||| || ||||| || || || || || || |||
Sbjct 965431 ATCCACAACTCTGATATAGATGCAGCCATTGAGACCTACAACCTGCTGTCTGAGAAGTGG 965372
Query 363546 ATTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTC 363605
||||| || ||| | || || ||| ||| || || ||| | || ||| | ||
Sbjct 965371 -TTCACTCATGCCTCTCCCACTCTGTTCAACGCAGGCACTAACAGACCCCAGCTCTCCAG 965313
Query 363606 TTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665
||||| || || |||||||| || ||| || || || | ||||||||| || |
Sbjct 965312 CTGCTTCCTGCTGGCCATGAAGGATGACAGCATTGATGGCATTTATGACACACTGAAACA 965253
Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC 363725
||||||||||| || || |||||| || ||||||||| | | | | || | |
Sbjct 965252 ATGTGCTCTTATCTCTAAATCTGCAGGAGGGATTGGTGTAGCAGTTAGCTGTATTAGATC 965193
Query 363726 A-CAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTC 363784
| ||| | ||||||||| || ||| || |||| ||||| || || || |||||
Sbjct 965192 AACAGGA-AGTTACATTGCTGGAACAAATGGTAACTCAAATGGTCTTGTGCCGATGCTGA 965134
Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGT 363844
| |||| |||| ||||| | || || ||||| ||||| || || || || |
Sbjct 965133 GAGTGTACAACAACACTGCACGCTATGTGGACCAAGGTGGCAATAAACGACCGGGTGCCT 965074
Query 363845 TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAA 363904
|||| || || | ||||| || ||| | ||||| ||||||||||| ||| |
Sbjct 965073 TTGCCATTTACTTGGAGCCATGGCACTTTGATGTGTTTGACTTTCTTGAGCTGAAGAAGA 965014
Query 363905 ACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACC 363964
|||| || |||||||| | | || || || || |||||||| || ||| | ||||||
Sbjct 965013 ACACTGGTAAAGAGGAGCAGAGGGCGCGAGACCTCTTCTATGCCCTATGGATCCCTGACC 964954
Query 363965 ATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTC 364024
|| |||||| | ||||| || | ||||| | | || || || || |
Sbjct 964953 TGTTCATGAAGAGAGTGGAAAACAACCAGGACTGGTCTTTGATGTGTCCCAGTGAGTGCC 964894
Query 364025 CAGGTCTTTCCGA-TGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCG 364083
| || | || ||| ||||| || || | || || ||| | |||||| |
Sbjct 964893 CTGGGTTGGATGAGTGT-TGGGGGGAGGAGTTTGAGAAGCTGTACACACGATATGAACAG 964835
Query 364084 GAGGGAA-----AGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGG 364138
||||| | | || || | ||| || ||| || | |||| ||||||||| |
Sbjct 964834 GAGGGTAGAGTGAAGCGGGT-GGTCAA----GGCTCAGCAGGTGTGGTATGCCATCATAG 964780
Query 364139 ATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGT 364198
| || |||| || || |||||||| || ||||||||||||||| | || ||| | |||
Sbjct 964779 AGTCTCAGACAGAAACGGGAACACCTTACATGTTGTACAAAGATGCCTGTAACAGGAAGA 964720
Query 364199 CCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAAT 364258
||||||||| | | || || || | || ||| | || || |||||| | || |
Sbjct 964719 GTAACCAGCAGAATTTGGGCACCATCAAATGCAGTAACTTGTGCACTGAGATTGTGGAGT 964660
Query 364259 ACAC 364262
| ||
Sbjct 964659 ATAC 964656
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1302918418378920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |