Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq18889 98.7 9e-16
seq4874 98.7 9e-16
seq22773 91.5 1e-13
seq10742 89.7 5e-13
>seq18889
Length=1054283
Score = 98.7 bits (108), Expect = 9e-16
Identities = 664/1058 (63%), Gaps = 28/1058 (3%)
Strand=Plus/Plus
Query 145109 GTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATG 145168
||| ||| ||| | ||||| || ||||| || ||||| || || | || ||||||||
Sbjct 964101 GTGTAGGCTTCGATGGACTCATTGTTGCCAAGTATTTGCGCTGTGGAGGCTGTGGGCATA 964160
Query 145169 TACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCC 145228
|||| ||| | || | || ||||| || || | ||||| ||| |
Sbjct 964161 GGGGCCAACAACAGGCTGTTCCTCACACCGTGTTTAGCAATCTTCTCCTTAAGCAGCTTC 964220
Query 145229 CAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTG 145288
|| ||||| ||| ||| ||| | |||||||||||||| |||| ||||||| ||
Sbjct 964221 CAGTCCCAGAGCTCAGTGGGCACCTTTTCCCACATGTCGTATTGCAGAATGCCCCTACTC 964280
Query 145289 GCGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTG-GCGAGCTCGCAACTCGC 145347
| ||| |||| | | | ||| |||| |||| || | |||||| || ||
Sbjct 964281 ACTGGGGAGCCTGGGTATGTCTCATAAG-GCCCGTCCTTTTCTGCCAACTCGCAGCTTGC 964339
Query 145348 CTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATC 145407
|||||| || | | || || || || || || | || |||||| ||||||
Sbjct 964340 CTCCAGGGCAGCATAGTAGATGGTTTCAAAGATCTGGATATTCAGCAGCTGGGCTTCAGA 964399
Query 145408 GCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCC 145467
|| || | || |||| || | || ||||| || || ||||| | || | ||
Sbjct 964400 ACTTTCAAATGGATAACGCATGAGGATGAAGGCATCTGCAAGACCCTGCACACCGATCCC 964459
Query 145468 GATGGGCCGATGTTTCATGTTG-----CTCATCCTCGCCGACTCGATAGGATATCGATTA 145522
|| |||| || | |||| ||| | || ||| | ||| | |||
Sbjct 964460 AATTGGCCTGTGGCGCTTGTTTGAATTCTCTGCTTCAGGAACTGGGTAGTAG-----TTA 964514
Query 145523 CGGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAA-CTTTTC 145581
||| || || ||||| | |||| || | ||| || || | || |||| |||||
Sbjct 964515 ATGTCAATGATCTTATTGAGATTTCTTACAATTACTTTAGTGAC-TGAGGCAAGCTTTTT 964573
Query 145582 AAAGTCAAACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATT 145641
|| ||||| | || | | | | || ||| | |||| || || || ||||| ||
Sbjct 964574 GAAATCAAAG-GTGCGTTCTGGAGTAACATACA--TGTTGAGAGCAATTGAGGCCAAGTT 964630
Query 145642 ACAAACTGC--CGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTA 145699
||| || || | || || || | | || | || ||||| | |||||| || ||
Sbjct 964631 ACAGACGGCTACTTCATCTTTGCTTG--TATACTCCACAATCTCAGTGCACAAGTTACTG 964688
Query 145700 CATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGC 145759
||||||||||| |||| ||| ||||| ||||| |||||||| || || || ||||| | |
Sbjct 964689 CATTTGATGGTGCCCAAATTCTGCTGGTTACTCTTCCTGTTACAGGCATCTTTGTACAAC 964748
Query 145760 ATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAGTCCTGCGCA 145819
||||| ||| || || || ||| | ||| | ||| | || | ||| ||
Sbjct 964749 ATGTAAGGTGTTCCCGTTTCTGTCTGAGACTCTATGATGGCATACCACACCTGCTGAGCC 964808
Query 145820 CGCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCG 145879
||| | ||| | ||||| | ||| ||| |||| |||| ||||||| |
Sbjct 964809 TTGACCACCCGCTTCACTCTACCCTCCTGTTCATATCGTGTGTACAGCTTCTCAAACTCC 964868
Query 145880 GAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCG 145939
|| | || || || || || |||| |||||||||||| ||||| | |
Sbjct 964869 TCCCCCCAACACTCATCCAACCCAGGGCACTCACTGGGACACATCAAAGACCAGTCCTGG 964928
Query 145940 TTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAG--TCGC 145997
||| | || | || ||| |||| || || | ||| || || || | | | ||||
Sbjct 964929 TTGTTTTCCACTCTCTTCATGAACAGGTCAGGGATCCATAGGGCATAGAAGAGGTCTCGC 964988
Query 145998 GCGCTTTGCAATCCTCAGCACCCATGTTTCGCTTCAAATTAAGCACACTATAGATGTCCG 146057
|| || ||| ||||| ||| |||| ||||| | ||| | | | | ||
Sbjct 964989 GCCCTCTGC--TCCTCTTTACCAGTGTTCTTCTTCAGCTCAAGAAAGTCAAACACATCAA 965046
Query 146058 CGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGT---TTGCCACCCTGGTCCA 146114
|||||| || || | || | ||| | ||| || |||| |||||||| |||||||
Sbjct 965047 AGTGCCATGGCTCCAAGTAAATGGCAAAGGCACCCGGTCGTTTATTGCCACCTTGGTCCA 965106
Query 146115 CGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGC 146152
| | ||| | ||||||| | || | || ||| |||
Sbjct 965107 CATAGCGTGCAGTGTTGTTGTACACTCTCAGCATCGGC 965144
>seq4874
Length=535125
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| | || |||||| || | ||| | ||| || || || || |||||||| |||
Sbjct 502713 CCACCCCTCAGACGCAGGACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAG 502654
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| || || ||||||||||| ||| |||| | | |||||| || || ||
Sbjct 502653 AGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCTGGGGGA 502594
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| ||||| ||| || ||| | | || | ||| || ||| ||| |
Sbjct 502593 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTTTCAATAGTGTCACTGGGCTCCACC 502534
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | |||| ||| || || || || ||||| || || ||||||||
Sbjct 502533 TCCAGAGTAATGGTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCAT 502487
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| | || |||||| || | ||| | ||| || || || || |||||||| |||
Sbjct 502257 CCACCTCTCAGACGCAGGACAAGATGGAGGGTAGATTCTTTCTGGATGTTGTAGTCGGAG 502198
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| || || ||||||||||| ||| |||| | | |||||| || || ||
Sbjct 502197 AGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCTGGGGGA 502138
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| ||||| ||| || ||| | | || | || || ||| ||| |
Sbjct 502137 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTTTCAATGGTGTCACTGGGCTCCACC 502078
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| || || || || ||||| || || ||||||||
Sbjct 502077 TCCAGAGTGATGGTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCAT 502031
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| | || |||||| || | ||| | ||| || || || || |||||||| |||
Sbjct 502485 CCACCTCTCAGACGCAGGACAAGATGGAGGGTAGATTCTTTCTGGATGTTGTAGTCGGAG 502426
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| || || ||||||||||| ||| |||| | | |||||| || || ||
Sbjct 502425 AGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCTGGGGGA 502366
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| ||||| ||| || ||| | | || | || || ||| ||| |
Sbjct 502365 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTTTCAATGGTGTCACTGGGCTCCACC 502306
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| || || || || ||||| || || ||||||||
Sbjct 502305 TCCAGAGTGATGGTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCAT 502259
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| | || ||||||||| | ||| | ||| || || || || |||||||| ||
Sbjct 502942 GCCACCCCTCAGACGCAGCACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCAGA 502883
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| |||||| || || ||||||||||| || |||| | | |||||| || || ||
Sbjct 502882 GAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGG 502823
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| ||||| ||||| ||| || ||| | | || | || || ||| ||| |
Sbjct 502822 AATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTTTCAATGGTGTCACTGGGCTCCAC 502763
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| || || || || ||||| || || ||||||||
Sbjct 502762 CTCCAGAGTGATGGTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCAT 502715
>seq22773
Length=730387
Score = 91.5 bits (100), Expect = 1e-13
Identities = 80/100 (80%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 145668 TGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGAT 145727
|||||| ||| ||||| | ||||| ||||| | |||||||| || ||||| ||||| |
Sbjct 300297 TGTATTCTACAATCTCAGTGCACAGGTTGCTGGACTTGATGGTGCCTAGATTCTGCTGGT 300356
Query 145728 TACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGG 145767
| || ||||| ||||| || || |||||||||||||| ||
Sbjct 300357 TGCTCTTCCTATTGCATGCATCTTTGTAGAGCATGTATGG 300396
>seq10742
Length=3397572
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || | ||| |||||||| || || | ||| || ||||||||||||||||| ||
Sbjct 2148449 CCTCCTCTCAATCGCAGCACCAAGTGGAGGGTGGATTCCTTTTGAATGTTGTAGTCTGAG 2148508
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| || || |||||||| || ||| | || | | ||| ||||| ||||||
Sbjct 2148509 AGGGTGCGACCATCTTCAAGCTGCTTACCAGCGAAAATCAGCCTCTGTTGGTCAGGAGGG 2148568
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || |||||||| ||| || ||||| | || | || || | | || |
Sbjct 2148569 ATACCCTCTTTGTCCTGGATCTTTGCCTTGACGTTTTCAATGGTGTCACTAGGTTCCACC 2148628
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| || || || || || || || || ||||||||
Sbjct 2148629 TCCAAAGTGATGGTCTTCCCAGTCAGGGTCTTAACAAAGATCTGCAT 2148675
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471859041830400
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