Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq18889 663 0.0
seq22773 118 1e-21
seq19222 111 2e-19
seq20084 96.9 4e-15
>seq18889
Length=1054283
Score = 663 bits (734), Expect = 0.0
Identities = 1338/1978 (68%), Gaps = 29/1978 (1%)
Strand=Plus/Plus
Query 62098 CTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCT 62157
||| ||||||||| | || || | | ||||||| ||||| || ||||| | |
Sbjct 963962 CTGTATGGATCCATTTTGAGCAATGAGCTTATTCTTCATCTCCTCGTTCCACAGCCCCCG 964021
Query 62158 CTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCT 62217
|| |||| | | || ||||| || || || | ||||| |||||||||| |||||
Sbjct 964022 TTCAGTTAGGTCCTTCAGCAGATGTGGGTTTACAATCTGAAACTCTCCAGACAGGACTCT 964081
Query 62218 CCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGC 62277
|| ||||| || || ||||| || | ||| | |||||||| || || | ||||| ||
Sbjct 964082 GCGTGTGTAGATGTTGCTGGTGTAGGCTTCGATGGACTCATTGTTGCCAAGTATTTGCGC 964141
Query 62278 AGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGAT 62337
|| || || || |||||||| |||| ||| | || || || | ||||| | | ||
Sbjct 964142 TGTGGAGGCTGTGGGCATAGGGGCCAACAACAGGCTGTTCCTCACACCGTGTTTAGCAAT 964201
Query 62338 TTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNN 62397
|| || || || | | ||| | ||| || || | || ||
Sbjct 964202 CTTCTCCTTAAGCAGCTTCCAGTCCCAGAGCTCAGTGGGCACCTTTTCCCACATGTCGTA 964261
Query 62398 TTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTC 62457
||| ||||| || |||| | || ||| ||||| || || || || ||||| ||
Sbjct 964262 TTGCAGAATGCCCCTACTCACTGGGGAGCCTGGGTATGTCTCATAAGGCCCGTCCTTTTC 964321
Query 62458 AGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATT 62517
|| | || || || ||||| | ||| | || || |||||||| ||||||| ||||
Sbjct 964322 TGCCAACTCGCAGCTTGCCTCCAGGGCAGCATAGTAGATGGTTTCAAAGATCTGGATATT 964381
Query 62518 TAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAA 62577
|| || ||||| || |||||||||||| | ||| || || || ||||| |
Sbjct 964382 CAGCAGCTGGGCTTCAGAACTTTCAAATGGATAACGCATGAGGATGAAGGCATCTGCAAG 964441
Query 62578 TCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAAT 62637
|| || ||||| || || || || || || | ||| || || | || ||||| ||||
Sbjct 964442 ACCCTGCACACCGATCCCAATTGGCCTGTGGCGCTTGTTTGAATTCTCTGCTTCAGGAAC 964501
Query 62638 AGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTT---GACCA- 62693
|| || || ||||| || || || |||||||||||||| ||||||||||| |||
Sbjct 964502 TGGGTAGTAGTTAATGTCAATGATCTTATTGAGATTTCTTACAATTACTTTAGTGACTGA 964561
Query 62694 --CATCCTTCAGTTTGAGAAAATCAAATCGCCCATCTA---TTACAAACATGTTCAATGC 62748
|| ||| ||||| ||||||| | ||| | ||| ||||||| | ||
Sbjct 964562 GGCAAGCTT---TTTGA---AATCAAAGGTGCGTTCTGGAGTAACATACATGTTGAGAGC 964615
Query 62749 AACAGATGCCAGATTACAAACGGCTACCTCAT--TAGCATCCGCATATTGTATTATCTCA 62806
|| || |||| ||||| |||||||| |||| | || | | ||| | | ||||||
Sbjct 964616 AATTGAGGCCAAGTTACAGACGGCTACTTCATCTTTGCTT--GTATACTCCACAATCTCA 964673
Query 62807 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 62866
||||| | ||||| || |||||||| || ||||| || || |||||||| |||||||
Sbjct 964674 GTGCACAAGTTACTGCATTTGATGGTGCCCAAATTCTGCTGGTTACTCTTCCTGTTACAG 964733
Query 62867 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 62926
||||| || || | ||| | || || || ||||| ||||||| ||||| || || | |
Sbjct 964734 GCATCTTTGTACAACATGTAAGGTGTTCCCGTTTCTGTCTGAGACTCTATGATGGCATAC 964793
Query 62927 CAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATAC 62986
|| || ||||||| | | || ||| || ||| ||| |||| |||
Sbjct 964794 CACACCTGCTGAGCCTTGACCACCCGCTTCACTCTACCCTCCTGTTCATATCGTGTGTAC 964853
Query 62987 AATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATC 63046
| || ||||| || |||||| | |||| ||||| || ||| |||||||||
Sbjct 964854 AGCTTCTCAAACTCCTCCCCCCAACACTCATCCAACCCAGGGCACTCACTGGGACACATC 964913
Query 63047 AACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCT 63106
|| ||||| || || | | ||||| ||||| || || ||||| ||||| || ||
Sbjct 964914 AAAGACCAGTCCTGGTTGTTTTCCACTCTCTTCATGAACAGGTCAGGGATCCATAGGGC- 964972
Query 63107 ATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 63165
||| || || |||| | || || ||||| || || || ||||| || || || || ||
Sbjct 964973 ATAGAAGAGGTCTCGCGCCCTCTGCTCCTCTTTACCAGTGTTCTTCTTCAGCTCAAGAAA 965032
Query 63166 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63225
| | | |||| | ||||| || |||||||| ||||| | | || || ||||| ||
Sbjct 965033 GTCAAACACATCAAAGTGCCATGGCTCCAAGTAAATGGCAAAGGCACCCGGTCGTTTATT 965092
Query 63226 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63285
|| || || || | || | || ||||| || || ||||||| ||| || | || |||
Sbjct 965093 GCCACCTTGGTCCACATAGCGTGCAGTGTTGTTGTACACTCTCAGCATCGGCACAAGACC 965152
Query 63286 ATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 63345
||| || ||||||| || || | || || ||||| | | | |||| |||| ||
Sbjct 965153 ATTTGAGTTACCATTTGTTCCAGCAATGTAACTTCCTGTTGATCTAATACAGCTAACTGC 965212
Query 63346 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 63405
|| ||| || || ||||| ||||||||| | || ||| |||| | || ||||| ||
Sbjct 965213 TACACCAATCCCTCCTGCAGATTTAGAGATAAGAGCACATTGTTTCAGTGTGTCATAAAT 965272
Query 63406 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 63465
||| || || || |||||| ||||| || || || ||||| || | ||| | | |
Sbjct 965273 GCCATCAATGCTGTCATCCTTCATGGCCAGCAGGAAGCAGCTGGAGAGCTGGGGTCTGTT 965332
Query 63466 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATT 63525
||| || || || || | || ||||| || ||||| ||||| || ||||| || || ||
Sbjct 965333 AGTGCCTGCGTTGAACAGAGTGGGAGAGGCATGAGTGAACCACTTCTCAGACAGCAGGTT 965392
Query 63526 GTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAA 63585
||| |||||||| |||| |||||||| | | || ||||| || || || | ||| |
Sbjct 965393 GTAGGTCTCAATGGCTGCATCTATATCAGAGTTGTGGATTCCGACAGCTACTCTCATGAG 965452
Query 63586 CATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAA 63645
||||||||| || | ||| | | || || ||||||| |||||| || || |
Sbjct 965453 CATGTGCTGTGGGCGCTCAGCCACTTTACCATTGATTTTCAGCAAGTAAGAGCGCTCTAG 965512
Query 63646 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 63705
|||||||| ||||| | ||||| ||||| || | || ||||| ||| | ||||||||
Sbjct 965513 CGTTTTAAAGCCAAAGAAATTGTAAGAAAAATCCCTATCATAAATTATAGCAGAGTTGAG 965572
Query 63706 TTTATCCTTATATTTGTTA--ACTACATCCATGGTAATACTT--GAAATAATAGGAAAAT 63761
|| | | |||| | || | ||| | ||| ||| || || || || | |
Sbjct 965573 GCGGTC--TTTGTTTGCAAGGACAAGATCTAGGGT--GTCTTGGGAGATCATGGGGGAGT 965628
Query 63762 GTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtt 63821
| | |||| |||||||||||||| ||| | ||||||||| || ||||| || | |
Sbjct 965629 GGCGCTTATTTAAAGGATTGACATAGTGGAACAGATCCTCCATGACGTCACTGAACACCT 965688
Query 63822 tttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCG 63881
| || || ||||| || |||||||| || || |||| || || || ||||||||||| |
Sbjct 965689 TCTTGGTCTCTTTATGGAGATTTGACACAGCAATTCGTGCAGCCAGGATGGCATAATCTG 965748
Query 63882 GATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTG 63941
| || | || || ||||| || || || || || || ||||||| || || || |
Sbjct 965749 GGTGCTTCGTGGTCAGTGTGGCAGCAATCTCTGCAGCAAGTGTGTCCAGCTCCACAGTGG 965808
Query 63942 TTACACCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGAT 64001
| || || | || | |||||||| |||||||| | |||| | || || | | |
Sbjct 965809 TCACTCCGCTGTACAGACCTTGGATCACCTTCATCGTGATTTGTGTGGGGTCCACAAACT 965868
Query 64002 CAGTGTTTAAGCCATAACATAATTTTCTAATACGAGATGTGATTTTATCAAACATGAC 64059
| | || | |||||||| | || || ||||| ||||||||||||||||||||
Sbjct 965869 CCGCATTGAGCCCATAACAGAGCTTCTGGATTCGAGAGGTGATTTTATCAAACATGAC 965926
>seq22773
Length=730387
Score = 118 bits (130), Expect = 1e-21
Identities = 140/190 (74%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 62430 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 62489
||||||| || || ||||| || | ||||||||||||| || ||||| || ||| | |
Sbjct 299790 CATATGTTTCATAAGGTCCATCTTGGGCAGCTAGTTCACAGCTGGCCTCCAAAGCAGCAT 299849
Query 62490 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGAT 62549
|||||||||| || || |||| | || |||| || || || || ||||||||||
Sbjct 299850 AATAAATGGTCTCAAAAATCTGGATGTTGAGATACTGGGCCTCTTCACTTTCAAATGGAT 299909
Query 62550 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 62609
|| | |||||| || ||||| || | || |||||||| || || |||||||| || |
Sbjct 299910 AACGCATGAGAATGAAGGCGTCCGCAAGACCCTGAACACCGATCCCAATAGGTCTGTGGC 299969
Query 62610 TCTTATTAGA 62619
| | |||||
Sbjct 299970 GCATGTTAGA 299979
Score = 89.7 bits (98), Expect = 7e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 62792 TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTA 62851
|||| || ||||||||||| || || || |||||||||| |||| ||| || || ||
Sbjct 300299 TATTCTACAATCTCAGTGCACAGGTTGCTGGACTTGATGGTGCCTAGATTCTGCTGGTTG 300358
Query 62852 CTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGAT 62911
||||| | || || ||||| || || || ||| |||| ||||| || || |||| ||
Sbjct 300359 CTCTTCCTATTGCATGCATCTTTGTAGAGCATGTATGGGGTACCCGTCTCTGTCTGTGAC 300418
Query 62912 TCTATAATCGCTTTCCA 62928
|| ||||| || | |||
Sbjct 300419 TCAATAATGGCATACCA 300435
Score = 87.8 bits (96), Expect = 2e-12
Identities = 99/130 (76%), Gaps = 2/130 (2%)
Strand=Plus/Plus
Query 63070 CACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATG 63129
||| ||||||||||| ||||| || ||||| ||||| | ||| ||||| | || ||| ||
Sbjct 300723 CACACGTTTCATAAAAAGATCTGGGATCCACAGAGCAAAAAACAGATCGCGGGCTCTCTG 300782
Query 63130 TTCCTCGTTTCCTGTATTCTT-TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACG 63188
||||| || || || || || |||||| || |||||| | | | |||| ||||||| |
Sbjct 300783 CTCCTCTTTACCAGTGTTTTTCTTTAAG-TCAAGGAACTCAAACACATCAAAATGCCATG 300841
Query 63189 GTTCCAAGTA 63198
| || | |||
Sbjct 300842 GCTCGAGGTA 300851
Score = 84.2 bits (92), Expect = 3e-11
Identities = 123/174 (71%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 63810 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 63869
|||| |||| ||| || || |||||||| | ||| || || || || | || || || |
Sbjct 301996 CACTGAATACTTTCTTGGTCTCTTTGTGCAAATTGGACACAGCGATGCGTGCAGCGAGGA 302055
Query 63870 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 63929
|||| || || || |||| || || || || || | || || || | ||||||||
Sbjct 302056 TGGCGTAGTCAGGGTGTTTGGTGGTCAGTGTAGCAGCGGTCTCTGCAGCTAAAGTGTCCA 302115
Query 63930 ATTCTACCGTTGTTACACCATTATATATTCCTTGGATAACCTTCATAGCTATTT 63983
|||| || || || || ||| | || | || ||||| |||||||||| ||||
Sbjct 302116 ATTCCACAGTGGTCACTCCACTGTACAGCCCCTGGATCACCTTCATAGTGATTT 302169
>seq19222
Length=928746
Score = 111 bits (122), Expect = 2e-19
Identities = 106/136 (78%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 32683 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 32742
|||| ||||| || || | ||| |||||| | || || || |||||||| || | |||||
Sbjct 773895 CCTCATCTCTGCTGATAAGTTCATTGGAATAAGTAAGGCCAGGCATTAGACCCCTCTTTT 773836
Query 32743 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 32802
| |||||| | |||| ||||| |||||||| ||||||||||| ||||| || ||||| |
Sbjct 773835 TCAGCCAATAAATGGCAGCAAAGGATCCAGAGAAGAAAATTCCCTCTACAGCTGCAAATG 773776
Query 32803 CAATAAGTCTCTCTCC 32818
| | || ||| || ||
Sbjct 773775 CCACAATTCTTTCACC 773760
Score = 89.7 bits (98), Expect = 7e-13
Identities = 88/114 (77%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 33158 CACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATG 33217
||| || ||||||||||| || ||||||| ||||| || ||||| |||||||||||| |
Sbjct 772321 CACCTCCTCCACTGTCCAGAAGGATGCCTGTGCCTGCTTGTACATTTTCCAGATGTCAGG 772262
Query 33218 ATATTGAATTGGAAAAATAACAAATCTATTTGGATTTTTTGCAAGGATTGGTTC 33271
|| || || || || || |||||||| | ||||||| | ||| | ||| ||
Sbjct 772261 GTACTGTATGGGGAACATCACAAATCTTCTGGGATTTTCTTGAAGCAGTGGCTC 772208
>seq20084
Length=15297
Score = 96.9 bits (106), Expect = 4e-15
Identities = 94/121 (78%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 32683 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 32742
||||||| | || || | ||||||||| || || ||||||||||| ||||| || || |
Sbjct 12701 CCTCGTCGCGGCTGATAAGTTCGTTGGAGAAAGTCAGTCCGGGCATCAGGCCTCGTTTCT 12760
Query 32743 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 32802
| ||||| || |||| || || |||||||| ||||| || || || || || |||||||
Sbjct 12761 TCAGCCAGAAAATGGCGGCGAACGATCCAGAGAAGAAGATCCCCTCCACAGCAGCAAAGG 12820
Query 32803 C 32803
|
Sbjct 12821 C 12821
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633425594376000
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