Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_008296.2
Length=177300
Score E
Sequences producing significant alignments: (Bits) Value
seq21827 623 1e-173
seq25415 520 1e-142
>seq21827
Length=6214
Score = 623 bits (690), Expect = 1e-173
Identities = 737/991 (74%), Gaps = 8/991 (1%)
Strand=Plus/Plus
Query 166053 CTTCTGCGAATGGGTTACCTCTACCAACAACCGTCTTTATGTTGGTTGGTTTGGCACACT 166112
|||||| | ||| | ||| || | ||||||||||| |||| |||||||| |
Sbjct 5030 CTTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTT 5089
Query 166113 GATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCTTTCGTAGCGGCAC 166171
|||||| || || | ||| | ||||| ||||| || || |||||||| | || || |
Sbjct 5090 GATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCCC 5148
Query 166172 CTCCTGTCGATATCGATGGGATCCGTGAGCCCGTAGCAGGCTCTCTAATGTATGGTAACA 166231
|||| || ||||| ||||| || ||||| || || | || |||||| | ||||| ||||
Sbjct 5149 CTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACA 5208
Query 166232 ACATCATCTCTGGTGCTGTTGTCCC--CTCCTCCAACGCAATTGGTCTTCACTTCTATCC 166289
| || || |||||||| || | || || || || || || ||| | || || || ||
Sbjct 5209 ATATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCG--ATAGGTTTGCATTTTTACCC 5266
Query 166290 CATCTGGGAAGCAGCATCACTTGATGAATGGCTTTATAACGGTGGTCCTTTCCAGCTCGT 166349
|| |||||||| || || ||||||||||| | || || |||||||||| |||| |
Sbjct 5267 GATATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAAT 5326
Query 166350 AGTCTTCCACTTCCTCATCGGCATCTATGCCTACATGGGTCGTGAATGGGAATTGTCTTA 166409
|| | ||||| | | || | | || ||||||||||| |||||| | ||
Sbjct 5327 TGTTCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTT 5386
Query 166410 CCGCCTCGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCACCTGTTGCAGCAGCATC 166469
||| || |||||||| ||||||||| || ||||| || || ||||||||||| || |
Sbjct 5387 CCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTAC 5446
Query 166470 CGCAGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCCCTGGG 166529
|| || ||| || ||||||| | |||||||| || ||||||| ||||| || ||
Sbjct 5447 TGCTGTTTTCTTGATCTATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGG 5506
Query 166530 TATCAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTCATGCA 166589
||| ||| || ||||||| |||| |||| |||||||| |||||||||||||| |||||
Sbjct 5507 AATCTCTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCA 5566
Query 166590 CCCCTTCCATATGCTGGGTGTAGCAGGTGTATTCGGTGGGTCACTTTTCTCGGCAATGCA 166649
||| || || ||| | || ||||| ||||||||||| || || || ||| || |||||
Sbjct 5567 CCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCA 5626
Query 166650 CGGCAGTCTCGTTACTTCCTCGCTCG-TCCGTGAGACCACTGAAACTGAGTCTCAAAACT 166708
|| | || ||||| | | | | || | || ||||| |||| ||| ||| ||
Sbjct 5627 TGGTTCCTTGGTAACTTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATG 5685
Query 166709 ATGGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTGGCTGCTCATGGTTACT 166768
| ||||||| || |||||||| ||||| |||||||| ||||| |||||||||||||| |
Sbjct 5686 AAGGTTACAGATTCGGTCAAGAGGAAGAAACCTACAATATCGTAGCTGCTCATGGTTATT 5745
Query 166769 TCGGTCGCCTGATCTTCCAATACGCTTCCTTCAACAACTCTCGCTCGCTGCACTTCTTCC 166828
| || || ||||||||||||| ||| |||||||||||||| || | ||||||||||
Sbjct 5746 TTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCC 5805
Query 166829 TCGCAGCATGGCCTGTTGTCGGTATCTGGTTTACTGCTCTTGGTGTTAGCACCATGGCAT 166888
| || || |||||||| || ||||| ||||| |||||| | ||| ||||||| ||||| |
Sbjct 5806 TAGCTGCTTGGCCTGTAGTAGGTATTTGGTTCACTGCTTTAGGTATTAGCACTATGGCTT 5865
Query 166889 TCAACCTCAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCA 166948
| ||| | || |||||||| |||||||| || | | ||| |||| |||||||| | |
Sbjct 5866 TTAACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTA 5925
Query 166949 ACACTTGGGCAGATGTCCTCAACCGTGCTGGTCTGGGTATGGAAGTAATGCACGAGCGTA 167008
| || ||||| ||| | ||||||||||| ||||||||||||| ||||| || ||||
Sbjct 5926 ATACCTGGGCTGATATTATCAACCGTGCTAACTTGGGTATGGAAGTTATGCATGAACGTA 5985
Query 167009 ATGCTCACAACTTCCCTCTGGATCTTGCTGC 167039
| ||||| ||||||||||| ||||| |||||
Sbjct 5986 ACGCTCATAACTTCCCTCTAGATCTAGCTGC 6016
>seq25415
Length=1491
Score = 520 bits (576), Expect = 1e-142
Identities = 728/1017 (72%), Gaps = 8/1017 (1%)
Strand=Plus/Plus
Query 167300 TTTGATGTCCTGGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTGGA 167359
|||||| | ||||||||||| | | ||||| || || ||||| || ||||| ||
Sbjct 366 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGT 425
Query 167360 TTACTTCTTTTTCCCACTGCTTATCTGGCAATTGGTGGCTGGCTTACTGGCACGACGTTT 167419
|| | || ||||| ||| ||| | || | || || ||| |||| || || || |||
Sbjct 426 CTATTGCTCTTTCCTTGTGCCTATTTCGCCGTAGGGGGTTGGTTTACAGGTACAACCTTT 485
Query 167420 GTTACGAGCTGGTATACCCACGGGTTGGCGTCTAGTTACC--TTG--AGGGTGCTAATTT 167475
|| || ||||||||||| || || || |||| | ||| ||| ||| | ||
Sbjct 486 GTAACTTCATGGTATACCCATGGATTAGCA---AGTTCCTATTTGGAAGGCTGCAACTTC 542
Query 167476 TCTCACGGCAGCAGTGTCAACTCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTG 167535
| | || || ||||| || ||||||||| | | | | || ||| | | |||| ||
Sbjct 543 T-TAACCGCCGCAGTTTCTACTCCTGCTAATAGTTTAGCACACTCTTTGTTGTTACTATG 601
Query 167536 GGGTCCTGAGTCTCAGGGGGATTTCATCAGGTGGTGCCAGCTTGGGGGACTCTGGGCTTT 167595
||| ||||| | || || ||||| | | ||||| || | || || || ||| ||||
Sbjct 602 GGGCCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTT 661
Query 167596 TGTGGCGCTCCACGGAGCCTTTGCTCTCATAGGATTTATGCTTCGGCAATTTGAGATAAG 167655
||| || || ||||| || || | || ||||| || ||| | || |||||||| |
Sbjct 662 TGTTGCTCTTCACGGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGC 721
Query 167656 TAGACTAGTAGGTATCCGTCCTTACAATGCGATTGCTTTTTCTGGTCCGATTGCTGTCTT 167715
| || || | || ||||| ||||| || || || || ||||| ||||| || ||
Sbjct 722 TCGATCTGTTCAATTACGACCTTATAATGCAATCGCATTCTCCGGTCCAATTGCGGTTTT 781
Query 167716 TGTGTCTGTTTTTCTCATCTATCCTCTCGGACAGTCCAGTTGGTTCTTTGCACCGTCGTT 167775
||| ||||| || || || ||||| || || ||||| ||||||||||||| || ||
Sbjct 782 TGTTTCTGTATTCCTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCAAGTTT 841
Query 167776 TGGTGTTGCAGCGATATTTAGATTCCTACTATTCCTACAGGGTTTCCATAACTGGACGCT 167835
|||||| || || |||||| ||||| | || || | || || || ||||| ||||| |
Sbjct 842 TGGTGTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATT 901
Query 167836 CAACCCTTTCCATATGATGGGAGTTGCTGGTATCCTAGGCGGTGCATTGCTTTCTGCAAT 167895
||||| || |||||||||||||||||||| | | |||| ||| |||| | || ||
Sbjct 902 GAACCCATTTCATATGATGGGAGTTGCTGGGGTATTGGGCGCTGCTCTGCTATGCGCTAT 961
Query 167896 CCATGGTGTTACAGTAGAGAATACTCTGTATGAAGATGGTGAGCAAGCAAACACTTTCAA 167955
||||||| ||| ||||| |||||| | | |||||||||||| ||||| || |||
Sbjct 962 TCATGGTGCTACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCG 1021
Query 167956 AGCATTTGATACGACTCAGGAAGAGGAAACTTATTCCATGGTCACTGCTAACCGATTCTG 168015
|| ||| | | ||||| | || ||||||||||| |||||||| |||||||| || ||
Sbjct 1022 GGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTG 1081
Query 168016 GTCTCAAATTTTTGGTATTGCTTTCAGCAATAAGCGTTGGTTGCACTTCTTTATGCTTTT 168075
||| ||||| ||||| ||||||| |||||| |||||||| || ||||||||| | ||
Sbjct 1082 GTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATT 1141
Query 168076 CGTTCCTGTCATGGGACTTTGGACAAGTTCTATTGGTATCATCGGTCTCGCACTTAATCT 168135
|| || || | || | |||| ||| || |||| | ||||||| || || |||||
Sbjct 1142 TGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCCCTGAATCT 1201
Query 168136 TCGTGCTTATGACTTTGTGTCTCAGGAAGTTAGAGCAGCAGAGGATCCAGAGTTTGAAAC 168195
||||| |||||||| || ||||||||| | | ||||| || ||||| || ||||| ||
Sbjct 1202 ACGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCGGAATTTGAGAC 1261
Query 168196 TTTCTATACGAAAAACATCCTCCTCAATGAAGGACTCCGTGCCTGGATGGCTCCAGTAGA 168255
|||||| || ||||| || ||| | || ||||| | ||||| |||||||| | |||
Sbjct 1262 TTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGA 1321
Query 168256 CCAACCACATGAAAACTTTGTATTCCCAGAAGAAGTATTGCCAAGAGGCAACGCTCT 168312
|| || ||||||||| || ||||||| || || || | || | || ||||||||
Sbjct 1322 TCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 1378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 567047224176000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |