Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= NC_008296.2 Length=177300 Score E Sequences producing significant alignments: (Bits) Value seq21827 623 1e-173 seq25415 520 1e-142 >seq21827 Length=6214 Score = 623 bits (690), Expect = 1e-173 Identities = 737/991 (74%), Gaps = 8/991 (1%) Strand=Plus/Plus Query 166053 CTTCTGCGAATGGGTTACCTCTACCAACAACCGTCTTTATGTTGGTTGGTTTGGCACACT 166112 |||||| | ||| | ||| || | ||||||||||| |||| |||||||| | Sbjct 5030 CTTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTT 5089 Query 166113 GATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCTTTCGTAGCGGCAC 166171 |||||| || || | ||| | ||||| ||||| || || |||||||| | || || | Sbjct 5090 GATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCCC 5148 Query 166172 CTCCTGTCGATATCGATGGGATCCGTGAGCCCGTAGCAGGCTCTCTAATGTATGGTAACA 166231 |||| || ||||| ||||| || ||||| || || | || |||||| | ||||| |||| Sbjct 5149 CTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACA 5208 Query 166232 ACATCATCTCTGGTGCTGTTGTCCC--CTCCTCCAACGCAATTGGTCTTCACTTCTATCC 166289 | || || |||||||| || | || || || || || || ||| | || || || || Sbjct 5209 ATATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCG--ATAGGTTTGCATTTTTACCC 5266 Query 166290 CATCTGGGAAGCAGCATCACTTGATGAATGGCTTTATAACGGTGGTCCTTTCCAGCTCGT 166349 || |||||||| || || ||||||||||| | || || |||||||||| |||| | Sbjct 5267 GATATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAAT 5326 Query 166350 AGTCTTCCACTTCCTCATCGGCATCTATGCCTACATGGGTCGTGAATGGGAATTGTCTTA 166409 || | ||||| | | || | | || ||||||||||| |||||| | || Sbjct 5327 TGTTCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTT 5386 Query 166410 CCGCCTCGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCACCTGTTGCAGCAGCATC 166469 ||| || |||||||| ||||||||| || ||||| || || ||||||||||| || | Sbjct 5387 CCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTAC 5446 Query 166470 CGCAGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCCCTGGG 166529 || || ||| || ||||||| | |||||||| || ||||||| ||||| || || Sbjct 5447 TGCTGTTTTCTTGATCTATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGG 5506 Query 166530 TATCAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTCATGCA 166589 ||| ||| || ||||||| |||| |||| |||||||| |||||||||||||| ||||| Sbjct 5507 AATCTCTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCA 5566 Query 166590 CCCCTTCCATATGCTGGGTGTAGCAGGTGTATTCGGTGGGTCACTTTTCTCGGCAATGCA 166649 ||| || || ||| | || ||||| ||||||||||| || || || ||| || ||||| Sbjct 5567 CCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCA 5626 Query 166650 CGGCAGTCTCGTTACTTCCTCGCTCG-TCCGTGAGACCACTGAAACTGAGTCTCAAAACT 166708 || | || ||||| | | | | || | || ||||| |||| ||| ||| || Sbjct 5627 TGGTTCCTTGGTAACTTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATG 5685 Query 166709 ATGGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTGGCTGCTCATGGTTACT 166768 | ||||||| || |||||||| ||||| |||||||| ||||| |||||||||||||| | Sbjct 5686 AAGGTTACAGATTCGGTCAAGAGGAAGAAACCTACAATATCGTAGCTGCTCATGGTTATT 5745 Query 166769 TCGGTCGCCTGATCTTCCAATACGCTTCCTTCAACAACTCTCGCTCGCTGCACTTCTTCC 166828 | || || ||||||||||||| ||| |||||||||||||| || | |||||||||| Sbjct 5746 TTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCC 5805 Query 166829 TCGCAGCATGGCCTGTTGTCGGTATCTGGTTTACTGCTCTTGGTGTTAGCACCATGGCAT 166888 | || || |||||||| || ||||| ||||| |||||| | ||| ||||||| ||||| | Sbjct 5806 TAGCTGCTTGGCCTGTAGTAGGTATTTGGTTCACTGCTTTAGGTATTAGCACTATGGCTT 5865 Query 166889 TCAACCTCAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCA 166948 | ||| | || |||||||| |||||||| || | | ||| |||| |||||||| | | Sbjct 5866 TTAACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTA 5925 Query 166949 ACACTTGGGCAGATGTCCTCAACCGTGCTGGTCTGGGTATGGAAGTAATGCACGAGCGTA 167008 | || ||||| ||| | ||||||||||| ||||||||||||| ||||| || |||| Sbjct 5926 ATACCTGGGCTGATATTATCAACCGTGCTAACTTGGGTATGGAAGTTATGCATGAACGTA 5985 Query 167009 ATGCTCACAACTTCCCTCTGGATCTTGCTGC 167039 | ||||| ||||||||||| ||||| ||||| Sbjct 5986 ACGCTCATAACTTCCCTCTAGATCTAGCTGC 6016 >seq25415 Length=1491 Score = 520 bits (576), Expect = 1e-142 Identities = 728/1017 (72%), Gaps = 8/1017 (1%) Strand=Plus/Plus Query 167300 TTTGATGTCCTGGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTGGA 167359 |||||| | ||||||||||| | | ||||| || || ||||| || ||||| || Sbjct 366 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGT 425 Query 167360 TTACTTCTTTTTCCCACTGCTTATCTGGCAATTGGTGGCTGGCTTACTGGCACGACGTTT 167419 || | || ||||| ||| ||| | || | || || ||| |||| || || || ||| Sbjct 426 CTATTGCTCTTTCCTTGTGCCTATTTCGCCGTAGGGGGTTGGTTTACAGGTACAACCTTT 485 Query 167420 GTTACGAGCTGGTATACCCACGGGTTGGCGTCTAGTTACC--TTG--AGGGTGCTAATTT 167475 || || ||||||||||| || || || |||| | ||| ||| ||| | || Sbjct 486 GTAACTTCATGGTATACCCATGGATTAGCA---AGTTCCTATTTGGAAGGCTGCAACTTC 542 Query 167476 TCTCACGGCAGCAGTGTCAACTCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTG 167535 | | || || ||||| || ||||||||| | | | | || ||| | | |||| || Sbjct 543 T-TAACCGCCGCAGTTTCTACTCCTGCTAATAGTTTAGCACACTCTTTGTTGTTACTATG 601 Query 167536 GGGTCCTGAGTCTCAGGGGGATTTCATCAGGTGGTGCCAGCTTGGGGGACTCTGGGCTTT 167595 ||| ||||| | || || ||||| | | ||||| || | || || || ||| |||| Sbjct 602 GGGCCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTT 661 Query 167596 TGTGGCGCTCCACGGAGCCTTTGCTCTCATAGGATTTATGCTTCGGCAATTTGAGATAAG 167655 ||| || || ||||| || || | || ||||| || ||| | || |||||||| | Sbjct 662 TGTTGCTCTTCACGGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGC 721 Query 167656 TAGACTAGTAGGTATCCGTCCTTACAATGCGATTGCTTTTTCTGGTCCGATTGCTGTCTT 167715 | || || | || ||||| ||||| || || || || ||||| ||||| || || Sbjct 722 TCGATCTGTTCAATTACGACCTTATAATGCAATCGCATTCTCCGGTCCAATTGCGGTTTT 781 Query 167716 TGTGTCTGTTTTTCTCATCTATCCTCTCGGACAGTCCAGTTGGTTCTTTGCACCGTCGTT 167775 ||| ||||| || || || ||||| || || ||||| ||||||||||||| || || Sbjct 782 TGTTTCTGTATTCCTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCAAGTTT 841 Query 167776 TGGTGTTGCAGCGATATTTAGATTCCTACTATTCCTACAGGGTTTCCATAACTGGACGCT 167835 |||||| || || |||||| ||||| | || || | || || || ||||| ||||| | Sbjct 842 TGGTGTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATT 901 Query 167836 CAACCCTTTCCATATGATGGGAGTTGCTGGTATCCTAGGCGGTGCATTGCTTTCTGCAAT 167895 ||||| || |||||||||||||||||||| | | |||| ||| |||| | || || Sbjct 902 GAACCCATTTCATATGATGGGAGTTGCTGGGGTATTGGGCGCTGCTCTGCTATGCGCTAT 961 Query 167896 CCATGGTGTTACAGTAGAGAATACTCTGTATGAAGATGGTGAGCAAGCAAACACTTTCAA 167955 ||||||| ||| ||||| |||||| | | |||||||||||| ||||| || ||| Sbjct 962 TCATGGTGCTACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCG 1021 Query 167956 AGCATTTGATACGACTCAGGAAGAGGAAACTTATTCCATGGTCACTGCTAACCGATTCTG 168015 || ||| | | ||||| | || ||||||||||| |||||||| |||||||| || || Sbjct 1022 GGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTG 1081 Query 168016 GTCTCAAATTTTTGGTATTGCTTTCAGCAATAAGCGTTGGTTGCACTTCTTTATGCTTTT 168075 ||| ||||| ||||| ||||||| |||||| |||||||| || ||||||||| | || Sbjct 1082 GTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATT 1141 Query 168076 CGTTCCTGTCATGGGACTTTGGACAAGTTCTATTGGTATCATCGGTCTCGCACTTAATCT 168135 || || || | || | |||| ||| || |||| | ||||||| || || ||||| Sbjct 1142 TGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCCCTGAATCT 1201 Query 168136 TCGTGCTTATGACTTTGTGTCTCAGGAAGTTAGAGCAGCAGAGGATCCAGAGTTTGAAAC 168195 ||||| |||||||| || ||||||||| | | ||||| || ||||| || ||||| || Sbjct 1202 ACGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCGGAATTTGAGAC 1261 Query 168196 TTTCTATACGAAAAACATCCTCCTCAATGAAGGACTCCGTGCCTGGATGGCTCCAGTAGA 168255 |||||| || ||||| || ||| | || ||||| | ||||| |||||||| | ||| Sbjct 1262 TTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGA 1321 Query 168256 CCAACCACATGAAAACTTTGTATTCCCAGAAGAAGTATTGCCAAGAGGCAACGCTCT 168312 || || ||||||||| || ||||||| || || || | || | || |||||||| Sbjct 1322 TCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 1378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 567047224176000