Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq2079 96.9 7e-15
seq18901 91.5 3e-13
seq12514 91.5 3e-13
seq5649 91.5 3e-13
seq23639 89.7 1e-12
seq16312 89.7 1e-12
seq2204 89.7 1e-12
seq1134 89.7 1e-12
seq24710 87.8 4e-12
seq18174 87.8 4e-12
seq7754 86.0 1e-11
>seq2079
Length=393069
Score = 96.9 bits (106), Expect = 7e-15
Identities = 70/81 (86%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 142495 GGTGAGATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTG 142554
||||| |||||||| |||||||||||||||||| ||||||||||||| |||||||
Sbjct 203045 GGTGACGTAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTG 203104
Query 142555 GGTTCGAGCCCCACATCGGGC 142575
|||||||||||||| | ||||
Sbjct 203105 GGTTCGAGCCCCACGTTGGGC 203125
Score = 91.5 bits (100), Expect = 3e-13
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560
|| |||||| |||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 204219 ATGGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 204278
Query 142561 AGCCCCACATCGGGC 142575
|||||||| | ||||
Sbjct 204279 AGCCCCACGTTGGGC 204293
>seq18901
Length=344417
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 80074 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 80015
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 80014 CCCCACGTTGGGC 80002
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 81656 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 81597
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 81596 CCCCACGTTGGGC 81584
>seq12514
Length=456182
Score = 91.5 bits (100), Expect = 3e-13
Identities = 69/80 (86%), Gaps = 1/80 (1%)
Strand=Plus/Plus
Query 142496 GTGAGATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGG 142555
|||| || |||||| |||||||||||||||||| ||||||||||||| ||||||||
Sbjct 165317 GTGACAT-GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGG 165375
Query 142556 GTTCGAGCCCCACATCGGGC 142575
||||||||||||| | ||||
Sbjct 165376 GTTCGAGCCCCACGTTGGGC 165395
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 162791 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 162850
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 162851 CCCACGTTGGGC 162862
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 164071 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 164130
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 164131 CCCACGTTGGGC 164142
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 164935 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 164994
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 164995 CCCACGTTGGGC 165006
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 166756 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 166815
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 166816 CCCACGTTGGGC 166827
>seq5649
Length=763695
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 81413 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 81472
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 81473 CCCCACGTTGGGC 81485
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 81928 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 81987
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 81988 CCCCACGTTGGGC 82000
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 84204 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 84263
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 84264 CCCCACGTTGGGC 84276
>seq23639
Length=428902
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 237399 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 237340
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 237339 CCCACGTTGGGC 237328
>seq16312
Length=416328
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 27015 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 26956
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 26955 CCCACGTTGGGC 26944
>seq2204
Length=159141
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 37325 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 37384
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 37385 CCCACGTTGGGC 37396
>seq1134
Length=200589
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 13465 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 13524
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 13525 CCCACGTTGGGC 13536
>seq24710
Length=165480
Score = 87.8 bits (96), Expect = 4e-12
Identities = 67/77 (87%), Gaps = 2/77 (3%)
Strand=Plus/Minus
Query 142048 CGCATGTCTCTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGT 142106
|||| ||||||||||||||||||| |||||| ||||||||||||||| ||| | |||||
Sbjct 109751 CGCA-GTCTCTGTGGCGCAATGGAATAGCGCGCTGGACTTCTAATCCAGAGGCTCCGGGT 109693
Query 142107 TCGACCCCCGCCAGAGA 142123
|||| |||| ||||||
Sbjct 109692 TCGAGTCCCGGCAGAGA 109676
>seq18174
Length=39188
Score = 87.8 bits (96), Expect = 4e-12
Identities = 64/73 (88%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 142052 TGTCTCTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGA 142110
|||||||||||||||||||| |||||| ||||||||||||||| ||| | |||||||||
Sbjct 536 TGTCTCTGTGGCGCAATGGAATAGCGCGCTGGACTTCTAATCCAGAGGCTCCGGGTTCGA 595
Query 142111 CCCCCGCCAGAGA 142123
|||| ||||||
Sbjct 596 GTCCCGGCAGAGA 608
>seq7754
Length=502572
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||| || |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 246499 AGCCTGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 246440
Query 142563 CCCCACATCGGG 142574
|||||| | |||
Sbjct 246439 CCCCACGTTGGG 246428
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027493611716460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |